Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0766 |
Symbol | |
ID | 6274419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 899652 |
End bp | 901517 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642612816 |
Product | Citrate transporter |
Protein accession | YP_001877382 |
Protein GI | 187735270 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGACCA CGCTTCTCAT TCTGGGAGTA TCCGCCGTTT TATTTGTCCA GGGGAGGATT CGTTCTGATC TTGTCGCGCT GTGTTCCCTG CTCTGCCTGA TTATGTTCGG GATTTTGAGC CCGGAACAGG CGCTTTCCGG CTTTTCCAAT TCCATTGTGG TGATGATGGT GGGGCTTTTC GTGGTGGGAG GCGCCATTTT CCGGACGGGC CTGGCCAAGA TGATGGGCGG CAGAATCATG AAACTGGCCG GCAGGAGCGA GTTGCGCCTG CTGGTGCTGA CCATGCTTGT TACAGCCGGC ATAGGCGCAT TTGTCAGCAA TACGGGGACG GTAGCGCTGA TGCTGCCTAT TTTGGTGAGC CTGGCTGCGG ACGGAGGCAT CCAGACGAGC CGTCTGCTCA TGCCCATGGC ATTTGCCAGC AGTATGGGCG GCATGCTGAC GCTGATCGGC ACGCCCCCCA ACCTTGTCGT CAACAACCAG CTTCAGGAGG CCGGAATGGA GGGGCTGGGC TTTTTTGCGT TCACCCCCAT CGGCCTTGTC TGCATCGTGA CGGGCATCTT GGTGCTGATC CCCCTCAGCA GGAGGTTTCT GGGACGCCAT GACGACAGGG CGGAACACGA GGCCAAGGGG AAATCCCTCA GCCAGTTGAT AGACGAGTAC CAGATTATTA ATAATCTTTA CCGCCTCCGG GTGCTGGAGG ATTCCCCTCT GACGGAACAT CCTCTGCATG ATCTTCAGAT ACCGGACCTT TACCGCGTGA ATATTGTGGA GGTGCGCCGC AGGCATTCCG GCCGGCATTC CTTCCTGCAG ACGGTCAGCC AGACCATGGC GGGTTCAGAT ACGAGGGTGG CCCGGGGCGA CGTCATTTAT GTCATGGGGG AGTTTGAGGA CGTGGCCCGT TTTGCCCGGG AATATGGGGC GGAGATGATT AACCGGAAGA CGTCGGAAGA TACGGATTCC CTGTTGAAAA GCAAATTGAA GTTTGACGAG ATAGGCATTG CGGAAATGCT GCTCATGCGG AACTCGGACC TTATCAACAT GCCCGTGAAG TCTTCGGGGC TGCGCGCCAA GTACGGGGTC AATATTCTGG CCATCCAGCG GGACAACCAT TACATTTTCC ATAATTTGAA GGATGTGAAG CTCCAGTACG GAGATACGCT GCTGATTCAG GGAACCTGGA CGGATATTGC GCGCCTGAGC GAGAAAACTT TTGAATGGGT TGTCGTGGGC CAGCCCCTGG CGGAGGCCTC CAAGGTGACC CTGACGCATA AGGCCCCCCT GGCCGCAGGC ATTATGCTGC TGATGATTGC GGCCATGGTG TTCAACTGGG TGCCTGCTGT GGCGGCGGTA TTGATTGCCG CCGTCCTGAT GGTGTTGTGC GGCTGTCTGC GCAATGTGGA GGAGGCGTAC CGGACGATCA ACTGGGAGAG CATCGTGCTG ATTGCCGCCA TGCTGCCGAT GTCCGTAGCG CTGGAGAAGA CGGGAGCCTC AGAGGCCATT TCCCACGGGC TGGTGGTCGG ACTGGGGGGA TTCGGGCCGT TTGCCCTGAT GGCGGGCGTC TATTTCACGG CGTCCCTGCT GACCATGTTT ATCAGCAATA CGGCTACGGC GGTGCTTCTG GCGCCTATCG CCCTGCAATC CGCGGCGAGT ATGGGCATCA GCCCCTATCC GCTGCTGCTG GCGGTTTCCG TAGGCACCAG CATGTGTTTT GCTTCACCCT TTTCCACGCC GCCCAATGCC CTGGTTATGC CGGCAGGGAA ATATACGTTC ATGGATTACG TGAAAGTGGG CGTTCCCCTG CAGGTGATCA TGGGGCTGGT CATGGTAGTG GTGATTCCGC TATTTTTCCC GTTCGGGAAG GCTTAA
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Protein sequence | MLTTLLILGV SAVLFVQGRI RSDLVALCSL LCLIMFGILS PEQALSGFSN SIVVMMVGLF VVGGAIFRTG LAKMMGGRIM KLAGRSELRL LVLTMLVTAG IGAFVSNTGT VALMLPILVS LAADGGIQTS RLLMPMAFAS SMGGMLTLIG TPPNLVVNNQ LQEAGMEGLG FFAFTPIGLV CIVTGILVLI PLSRRFLGRH DDRAEHEAKG KSLSQLIDEY QIINNLYRLR VLEDSPLTEH PLHDLQIPDL YRVNIVEVRR RHSGRHSFLQ TVSQTMAGSD TRVARGDVIY VMGEFEDVAR FAREYGAEMI NRKTSEDTDS LLKSKLKFDE IGIAEMLLMR NSDLINMPVK SSGLRAKYGV NILAIQRDNH YIFHNLKDVK LQYGDTLLIQ GTWTDIARLS EKTFEWVVVG QPLAEASKVT LTHKAPLAAG IMLLMIAAMV FNWVPAVAAV LIAAVLMVLC GCLRNVEEAY RTINWESIVL IAAMLPMSVA LEKTGASEAI SHGLVVGLGG FGPFALMAGV YFTASLLTMF ISNTATAVLL APIALQSAAS MGISPYPLLL AVSVGTSMCF ASPFSTPPNA LVMPAGKYTF MDYVKVGVPL QVIMGLVMVV VIPLFFPFGK A
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