Gene Amuc_0766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0766 
Symbol 
ID6274419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp899652 
End bp901517 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content58% 
IMG OID642612816 
ProductCitrate transporter 
Protein accessionYP_001877382 
Protein GI187735270 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACCA CGCTTCTCAT TCTGGGAGTA TCCGCCGTTT TATTTGTCCA GGGGAGGATT 
CGTTCTGATC TTGTCGCGCT GTGTTCCCTG CTCTGCCTGA TTATGTTCGG GATTTTGAGC
CCGGAACAGG CGCTTTCCGG CTTTTCCAAT TCCATTGTGG TGATGATGGT GGGGCTTTTC
GTGGTGGGAG GCGCCATTTT CCGGACGGGC CTGGCCAAGA TGATGGGCGG CAGAATCATG
AAACTGGCCG GCAGGAGCGA GTTGCGCCTG CTGGTGCTGA CCATGCTTGT TACAGCCGGC
ATAGGCGCAT TTGTCAGCAA TACGGGGACG GTAGCGCTGA TGCTGCCTAT TTTGGTGAGC
CTGGCTGCGG ACGGAGGCAT CCAGACGAGC CGTCTGCTCA TGCCCATGGC ATTTGCCAGC
AGTATGGGCG GCATGCTGAC GCTGATCGGC ACGCCCCCCA ACCTTGTCGT CAACAACCAG
CTTCAGGAGG CCGGAATGGA GGGGCTGGGC TTTTTTGCGT TCACCCCCAT CGGCCTTGTC
TGCATCGTGA CGGGCATCTT GGTGCTGATC CCCCTCAGCA GGAGGTTTCT GGGACGCCAT
GACGACAGGG CGGAACACGA GGCCAAGGGG AAATCCCTCA GCCAGTTGAT AGACGAGTAC
CAGATTATTA ATAATCTTTA CCGCCTCCGG GTGCTGGAGG ATTCCCCTCT GACGGAACAT
CCTCTGCATG ATCTTCAGAT ACCGGACCTT TACCGCGTGA ATATTGTGGA GGTGCGCCGC
AGGCATTCCG GCCGGCATTC CTTCCTGCAG ACGGTCAGCC AGACCATGGC GGGTTCAGAT
ACGAGGGTGG CCCGGGGCGA CGTCATTTAT GTCATGGGGG AGTTTGAGGA CGTGGCCCGT
TTTGCCCGGG AATATGGGGC GGAGATGATT AACCGGAAGA CGTCGGAAGA TACGGATTCC
CTGTTGAAAA GCAAATTGAA GTTTGACGAG ATAGGCATTG CGGAAATGCT GCTCATGCGG
AACTCGGACC TTATCAACAT GCCCGTGAAG TCTTCGGGGC TGCGCGCCAA GTACGGGGTC
AATATTCTGG CCATCCAGCG GGACAACCAT TACATTTTCC ATAATTTGAA GGATGTGAAG
CTCCAGTACG GAGATACGCT GCTGATTCAG GGAACCTGGA CGGATATTGC GCGCCTGAGC
GAGAAAACTT TTGAATGGGT TGTCGTGGGC CAGCCCCTGG CGGAGGCCTC CAAGGTGACC
CTGACGCATA AGGCCCCCCT GGCCGCAGGC ATTATGCTGC TGATGATTGC GGCCATGGTG
TTCAACTGGG TGCCTGCTGT GGCGGCGGTA TTGATTGCCG CCGTCCTGAT GGTGTTGTGC
GGCTGTCTGC GCAATGTGGA GGAGGCGTAC CGGACGATCA ACTGGGAGAG CATCGTGCTG
ATTGCCGCCA TGCTGCCGAT GTCCGTAGCG CTGGAGAAGA CGGGAGCCTC AGAGGCCATT
TCCCACGGGC TGGTGGTCGG ACTGGGGGGA TTCGGGCCGT TTGCCCTGAT GGCGGGCGTC
TATTTCACGG CGTCCCTGCT GACCATGTTT ATCAGCAATA CGGCTACGGC GGTGCTTCTG
GCGCCTATCG CCCTGCAATC CGCGGCGAGT ATGGGCATCA GCCCCTATCC GCTGCTGCTG
GCGGTTTCCG TAGGCACCAG CATGTGTTTT GCTTCACCCT TTTCCACGCC GCCCAATGCC
CTGGTTATGC CGGCAGGGAA ATATACGTTC ATGGATTACG TGAAAGTGGG CGTTCCCCTG
CAGGTGATCA TGGGGCTGGT CATGGTAGTG GTGATTCCGC TATTTTTCCC GTTCGGGAAG
GCTTAA
 
Protein sequence
MLTTLLILGV SAVLFVQGRI RSDLVALCSL LCLIMFGILS PEQALSGFSN SIVVMMVGLF 
VVGGAIFRTG LAKMMGGRIM KLAGRSELRL LVLTMLVTAG IGAFVSNTGT VALMLPILVS
LAADGGIQTS RLLMPMAFAS SMGGMLTLIG TPPNLVVNNQ LQEAGMEGLG FFAFTPIGLV
CIVTGILVLI PLSRRFLGRH DDRAEHEAKG KSLSQLIDEY QIINNLYRLR VLEDSPLTEH
PLHDLQIPDL YRVNIVEVRR RHSGRHSFLQ TVSQTMAGSD TRVARGDVIY VMGEFEDVAR
FAREYGAEMI NRKTSEDTDS LLKSKLKFDE IGIAEMLLMR NSDLINMPVK SSGLRAKYGV
NILAIQRDNH YIFHNLKDVK LQYGDTLLIQ GTWTDIARLS EKTFEWVVVG QPLAEASKVT
LTHKAPLAAG IMLLMIAAMV FNWVPAVAAV LIAAVLMVLC GCLRNVEEAY RTINWESIVL
IAAMLPMSVA LEKTGASEAI SHGLVVGLGG FGPFALMAGV YFTASLLTMF ISNTATAVLL
APIALQSAAS MGISPYPLLL AVSVGTSMCF ASPFSTPPNA LVMPAGKYTF MDYVKVGVPL
QVIMGLVMVV VIPLFFPFGK A