Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0753 |
Symbol | |
ID | 6275013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 886436 |
End bp | 887422 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642612804 |
Product | glycosyl transferase family 8 |
Protein accession | YP_001877370 |
Protein GI | 187735258 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.833822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.756645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATC CGATGAAAAA GAATGAATTT GCCGTCGTCC TGGCCAGTGA CAACAGGGGC ATTCTACCTT TGAGCGTTAC TGTCTTTTCT TTGCTGAATA CTGCCGGTCC GGAGACTTTT TACAAAATTT ACGTTCTTTC CGACGGCATT GACGGAGAGA ACTGGGCGAG CGTGGAGCGG CTGGCCGCTC CGTTCGATTG CCGTCTGGAG TTCATAGACG TTTCCGGCAT TTTGGAAAAG CACGACTTCC CCCATACGGA ACAATGGCCG GTGCCAGCCT GGGGACGCGT GTTCATTCCG GAATTATTGA AGGAAGAGCG GGGCAATATT CTGTATCTGG ACATTGACGT TCTGGTTTGC CGGGATTTGA CGGAGCTGTT CCGGACGAAT ATGGACGGAA AAGCAATAGG GGTGGTGTTT GAGAATTTTT CCAGACCCGG TTCCCATTTT AACGAACGTC TTGAGATGCC GCTGACCTGC ACGGGATATT TCAATTCCGG CGTGCTGCTG ATGAATGTGG ATGTCTTCCG GGAGAAGAAT CTGGTCAGGG CTGTGCTGGA TTATGCCGTC ACTCACCGGG ACAGGCTGAC ATGTCCGGAC CAGGATGCCT TGAACGGAGC CCTGTGCGAG CTGACTGTGC CGCTGCACCC GCGCTGGAAC TGGCATGACG GTTTGACGCG CCGCATTTTG AAAAACGATC CCCGGGAACA GTTCTGGCGC GGCGTCACGC CGCGCCAGGC GGTGGAAGCG GCTTTGGAAC CGGGCATTCT TCATTACCAG GGGGTGCACA AGCCCTGGCG GTATAATTGG CGTTATGAAG GGGAACGTTA CGAACGGGTT ATGCGTGAAG CCGGGCTGCT GCGCGGTCCG CTGCCCGGAA GAACGCTCCC GGCCGTCTTG AAAAAGCACC TTTACCGGCC TGTTTACCGG ATGACGGCCA GAAAGATTTT AAGGCTGAAG GAAGGGTTTG ATAACCGGCT CCTTTGA
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Protein sequence | MNNPMKKNEF AVVLASDNRG ILPLSVTVFS LLNTAGPETF YKIYVLSDGI DGENWASVER LAAPFDCRLE FIDVSGILEK HDFPHTEQWP VPAWGRVFIP ELLKEERGNI LYLDIDVLVC RDLTELFRTN MDGKAIGVVF ENFSRPGSHF NERLEMPLTC TGYFNSGVLL MNVDVFREKN LVRAVLDYAV THRDRLTCPD QDALNGALCE LTVPLHPRWN WHDGLTRRIL KNDPREQFWR GVTPRQAVEA ALEPGILHYQ GVHKPWRYNW RYEGERYERV MREAGLLRGP LPGRTLPAVL KKHLYRPVYR MTARKILRLK EGFDNRLL
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