| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0749 |
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| Symbol | |
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| ID | 6274037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 883280 |
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| End bp | 884014 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642612800 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001877366 |
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| Protein GI | 187735254 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.844641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTTT CAGATTCCAT CCAGGTTCCT TCGGGCGTCC TGTTGATTGA CAAGGCGCGG
GACATGACTT CCCACGATGT GGTGGCAATT GCGCGCCGTT CCCTGGGAAT TAAGAAAATA
GGCCATTGCG GCACGCTGGA TCCCATGGCT ACGGGATTGC TGATGCTGGT GGTAGGGAAG
GCGACCAAGC TTCAGGACAA GTTGATGTGC GAACACAAGG AATACGCCGG AACCCTTATG
CTGGGCGTGG AGACTTCCTC TCAAGATGCC ATGGGAGAAA TAGTGGCGGA GTATTCCGTA
GACGGAGTGA CGGAACAGGC CGTGCGTGAA GCGTTTGACC GGTTTGACGG AGCTTTTGAA
CAAATTCCTC CGATGGTTTC CGCCATCAAA AAGGACGGGG TGCCGCTGTA CAAACTGGCC
CGGAAAGGTC AGGAAATTGT GCGGGAGCCG CGGCCTGTGG AAGTGTTTGG CCACGGAATT
TCACGCGTGG CCATTCCGGA AGTGGATTTT ACCGTTCAAT GTTCCAAAGG TTTTTATGTG
CGGTCCTATG CTTATGATAT TGGGAAGGCA TTGGGCTGCG GAGCGCATTT GAGCGCCCTC
CGGCGCACCA GGTCTGGTTC TTTTACGCTG GACCGCGCCA TTACGGTGGA CACCCTGAAA
ACCGCGCCCA GGGAGGAACT GTTCCGGGCC ATGCTTTCCC TGAAGGAGCT GGCGGATATT
CTGATTGCCG GGTAG
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| Protein sequence | MNVSDSIQVP SGVLLIDKAR DMTSHDVVAI ARRSLGIKKI GHCGTLDPMA TGLLMLVVGK
ATKLQDKLMC EHKEYAGTLM LGVETSSQDA MGEIVAEYSV DGVTEQAVRE AFDRFDGAFE
QIPPMVSAIK KDGVPLYKLA RKGQEIVREP RPVEVFGHGI SRVAIPEVDF TVQCSKGFYV
RSYAYDIGKA LGCGAHLSAL RRTRSGSFTL DRAITVDTLK TAPREELFRA MLSLKELADI
LIAG
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