| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0745 |
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| Symbol | |
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| ID | 6275543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 880605 |
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| End bp | 881246 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642612796 |
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| Product | hypothetical protein |
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| Protein accession | YP_001877362 |
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| Protein GI | 187735250 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.836377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACAC CTTTTTTGAA CCGTAAGTCC AAGGGATTCA CGTTGATTGA ATTGCTTGTG
GTGATTGCCA TTATCCTGAC GCTGGCCGGC ATCGCCATGA CGGTGGTGAA CGGCGTGATG
GAAAAATCCA AGGTTACCAC GGCGCGAAGC GACTGCAACG GCCTGCAGAC GGCTGTGGAA
AATTACATGC TGGACAACGG CCGCGTTCCC GTGGCCTGGA GCAGCCGGGA AATGACCAAG
CAGGCCCACA AGGACGGACA GTATTACGTG ACAACCGCCG TGGACGACGA TAGCCGCATC
ATGAGCATCC TGACCAATTA TATGGACCGG GCGGATGAGG ACAGAAAGCT GAATCCCAAG
AAAACGGCTT ATTTCAATAC GACGACTACG GATGTGGAAG GCGCTCCCGG CCTGTTTTTT
GAAAGCCGCG GCCGTGTGGG CCTGATGGAT CCTTGGGAAT CTCCCTATTA CATCATTTTG
AATGCCAACC CTGACGACCG TACTCCCCGT GTTCAGGTAG GTTCCCGGAT GGTGACCAAG
AACGTGGCCG TTTACAGCAC CGGCAAGGAC AAGCAGGGCA GCACGGCGGA CGGCCATATC
AACAATCCGG AATTGACGGA AGACAATGTG ACTTCCTGGT AA
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| Protein sequence | MKTPFLNRKS KGFTLIELLV VIAIILTLAG IAMTVVNGVM EKSKVTTARS DCNGLQTAVE
NYMLDNGRVP VAWSSREMTK QAHKDGQYYV TTAVDDDSRI MSILTNYMDR ADEDRKLNPK
KTAYFNTTTT DVEGAPGLFF ESRGRVGLMD PWESPYYIIL NANPDDRTPR VQVGSRMVTK
NVAVYSTGKD KQGSTADGHI NNPELTEDNV TSW
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