Gene Amuc_0740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0740 
Symbol 
ID6273771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp876068 
End bp876706 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID642612791 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_001877357 
Protein GI187735245 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.865984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC TGATCGCTTT TGATCTGGAC GGAACCATTG GGGACACGGT CCCTATGTGC 
ATCAGGGCAT TTGAAAAAGC AGTTTCTCCC TATGCCGGAC ACACGCTGAG CGAACGGGAA
ATCACGCAGA CTTTCGGCCT GAATGAAGTA GGAATGATCA AGAAAGTTGC TGGAGAAAAA
TGGCGGGAAG CTCTCCATGA TTTCTACCCG GTTTATGAAG AAATGCATCA ATCATGCCCG
TCTCCGTATG AAGGTATACG TGAATTGATA AAAACCTTGC AAAAGGCTGG CGTGCTTGTC
GCCCTGATTA CCGGGAAGGG AGACAAAAGC TGCCGCATCA CGCTTGAGCA ATTCGGCATG
CGGAATTTGT TCTGTTCCAT CAAGACCGGA ACGGAAGACA AACCAAACAA GGCGGAAGCC
ATTGAAGAAC TTCTGCATGA CTTCCGCTTG AACAAAGATG AATTTTACTA TATCGGGGAT
GCGGTTTCGG ATGTGGCCGC CTGCAACAAA GCGGGGGTGA CCTGCCTGTC CGCCGCCTGG
GCAACGACCG CAGATGTCAA CGGATTGAAA AAAGCCAACC CCTCAAAGGT TTTTCCCAGC
ATAAAGGAAT TGACATTATT CCTGTCCATT GAGAAATAA
 
Protein sequence
MIKLIAFDLD GTIGDTVPMC IRAFEKAVSP YAGHTLSERE ITQTFGLNEV GMIKKVAGEK 
WREALHDFYP VYEEMHQSCP SPYEGIRELI KTLQKAGVLV ALITGKGDKS CRITLEQFGM
RNLFCSIKTG TEDKPNKAEA IEELLHDFRL NKDEFYYIGD AVSDVAACNK AGVTCLSAAW
ATTADVNGLK KANPSKVFPS IKELTLFLSI EK