Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0740 |
Symbol | |
ID | 6273771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 876068 |
End bp | 876706 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642612791 |
Product | Haloacid dehalogenase domain protein hydrolase |
Protein accession | YP_001877357 |
Protein GI | 187735245 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.865984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGC TGATCGCTTT TGATCTGGAC GGAACCATTG GGGACACGGT CCCTATGTGC ATCAGGGCAT TTGAAAAAGC AGTTTCTCCC TATGCCGGAC ACACGCTGAG CGAACGGGAA ATCACGCAGA CTTTCGGCCT GAATGAAGTA GGAATGATCA AGAAAGTTGC TGGAGAAAAA TGGCGGGAAG CTCTCCATGA TTTCTACCCG GTTTATGAAG AAATGCATCA ATCATGCCCG TCTCCGTATG AAGGTATACG TGAATTGATA AAAACCTTGC AAAAGGCTGG CGTGCTTGTC GCCCTGATTA CCGGGAAGGG AGACAAAAGC TGCCGCATCA CGCTTGAGCA ATTCGGCATG CGGAATTTGT TCTGTTCCAT CAAGACCGGA ACGGAAGACA AACCAAACAA GGCGGAAGCC ATTGAAGAAC TTCTGCATGA CTTCCGCTTG AACAAAGATG AATTTTACTA TATCGGGGAT GCGGTTTCGG ATGTGGCCGC CTGCAACAAA GCGGGGGTGA CCTGCCTGTC CGCCGCCTGG GCAACGACCG CAGATGTCAA CGGATTGAAA AAAGCCAACC CCTCAAAGGT TTTTCCCAGC ATAAAGGAAT TGACATTATT CCTGTCCATT GAGAAATAA
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Protein sequence | MIKLIAFDLD GTIGDTVPMC IRAFEKAVSP YAGHTLSERE ITQTFGLNEV GMIKKVAGEK WREALHDFYP VYEEMHQSCP SPYEGIRELI KTLQKAGVLV ALITGKGDKS CRITLEQFGM RNLFCSIKTG TEDKPNKAEA IEELLHDFRL NKDEFYYIGD AVSDVAACNK AGVTCLSAAW ATTADVNGLK KANPSKVFPS IKELTLFLSI EK
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