Gene Amuc_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0736 
Symbol 
ID6273781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp871714 
End bp872208 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content49% 
IMG OID642612787 
Productprotein tyrosine phosphatase 
Protein accessionYP_001877353 
Protein GI187735241 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0397767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTC CCGAACCTTA CCGAGTCCTG TTTGTCTGTC TGGGCAACAT CTGCCGCTCT 
CCTGCCGCTG AAATCATTTT CAAAAAAATG GTCGCAGAAC AAGGTTTGGA ACATTTGGTT
GAGAGCGATT CCGCCGGAAT GATCGGTTAT CATCGGGGCT GCCCTCCGGA TAGCCGGATG
CTGACGGCAC TGAAAAAATA CGGATATGAG GATCCGGGAC TTAAGTCGCG CCCCGTGCGG
AAAGAGGATT TGGAACAATT TGACCTGATT GTGGGAATGG ACCGTGAAAA TCTGCGGGAT
TTGAAACGAT TGGATAAAAA GGGACAATGG ACAGGCAAAA TAGTGCCCAT GTGTTTTTTC
ACGACTCGTT TTCCGGATGA AGAAGTACCG GATCCCTATT ATGGGGGACA GGAAGGCTTT
GAGCATGTGG TAAAATTGCT GCAGGACGGT TGCGGCAATC TGCTGGAGCG TTTGAAGGAG
CAGCTTTCCT TGTAA
 
Protein sequence
MNAPEPYRVL FVCLGNICRS PAAEIIFKKM VAEQGLEHLV ESDSAGMIGY HRGCPPDSRM 
LTALKKYGYE DPGLKSRPVR KEDLEQFDLI VGMDRENLRD LKRLDKKGQW TGKIVPMCFF
TTRFPDEEVP DPYYGGQEGF EHVVKLLQDG CGNLLERLKE QLSL