| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0726 |
|---|
| Symbol | |
|---|
| ID | 6273801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 856939 |
|---|
| End bp | 857535 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642612778 |
|---|
| Product | FHA domain containing protein |
|---|
| Protein accession | YP_001877344 |
|---|
| Protein GI | 187735232 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1716] FOG: FHA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 0.192616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGCC TTTCCATCCA CCTTCCCGAC GGTTCTGAAA AAACCATAGT TCTTCCGAAG
AACGGTGAAT ATTTCGCACG CATCGGACGT GACGAGCATT GCGAGATTGT GCTTCCCTTT
CAGTCGGTTT CCGGAGAGCA TGCCTTGCTT CAGTTTAAGG AAGGGGGATA TGTCCTGGAG
GACCTTGGTT CTACTAATGG AACTAAAATC AACGGCCTGA CGCCGATGGG CGCCGCAACC
CTTTACGATG GCGATGAAAT CGCTTTGGGG GATGCCAGGC TCCGGTTTGC GGAAGAGCCA
TCTCCGGGAT TTTCTGCCGA ATTATCCGGG AGAGAAGAAG AGGCCGCTCC TTCGATCGCT
ATGCGGAACT TACAGCAGTT GGCGGATGAA GCCGCCCGCA CGACCCGGAA TCATTATTTA
TGGATGGCCC TTTATGCCGT CCTGATATTT TTTCTGGCTG TGTTTGCCGG ATTAACCTAC
AAACATTACA GGGTAACGGG TGAATTGCTG CCTCTTCAAT GGCTGGGTAT TGAATCCCCC
AAGGCCGCCT TGAAATCCAT GCCTCTTCCT CAGACGGAAA ACGGTATGCA GCTCTGA
|
|---|
| Protein sequence | MPRLSIHLPD GSEKTIVLPK NGEYFARIGR DEHCEIVLPF QSVSGEHALL QFKEGGYVLE
DLGSTNGTKI NGLTPMGAAT LYDGDEIALG DARLRFAEEP SPGFSAELSG REEEAAPSIA
MRNLQQLADE AARTTRNHYL WMALYAVLIF FLAVFAGLTY KHYRVTGELL PLQWLGIESP
KAALKSMPLP QTENGMQL
|
|---|
| |