| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0720 |
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| Symbol | |
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| ID | 6273856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 849108 |
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| End bp | 850397 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642612772 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001877338 |
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| Protein GI | 187735226 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00473762 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATTCAT TCGCTTACAA AAACGGCACG CTCTACTGTG AAAACGTCAA CCTTCAGGAA
CTGGCGGACA AGGAAAGCAC ACCCCTGTAC GTTTATAGCA AACAAACCAT TTTAAACCAC
TTTCACCGCC TCAGGGAAGC TCTGGCACCG CTTAACGCGG AAGTGGCCTA CGCCGTCAAA
GCCTGCTCCA ACATCGCCAT CCTGAACCTC ATGGCCCGCA ACGGGGCGGG ATTCGACATC
GTCTCCGGCG GAGAACTCTT CCGTGTCCTC AAAGCCGGGG GAGATCCGTC CAAATGCACT
TATGCCGGCG TAGGAAAAAC CGAGCAGGAA ATCCGTTATG CCCTGGCCCA GGGCATTTAT
TGCTTCAATG TGGAATCCGA AGCGGAACTG CGGGCCATTA ACGCCATTGC CGCCTCCATG
GGAGTCAAGG CTCCGGTGGC CGTGCGCGTC AATCCCAACG TAGAGGCGGG AACGCACAAA
TACATTACTA CCGGCAAGGC TGAAAATAAA TTCGGCGTGG ACTTCGAACG CATTGAATCT
CTTTATGAGA TGGCGGCCCG CGAACTTCCG AACCTTCATC TGAAAGGGTT GCAAATGCAT
ATCGGCTCCC AGCTTACCCA GGCGAAACCC TTCCTAGAAG CCGTCAGGAA AGTCGCCCCC
CTGGCTGCTT CCCTGAAAGA AAAACACGGC ATTGAATTTT TCTCCATCGG AGGAGGAATT
GGCATCGTTT ACCAGGGCAC GCTGGATTCC GGCGTTCAGG AATGGTGGAA TGAGGACTGC
GCCCAGCTCA CGCTGAGCAC TTACGCCCAG GCCGTCGTCC CCACCCTGCA ACCTCTGGGA
TTACACATCA TTGTGGAACC GGGCCGTCTT ATCGTAGGAA ATGCGGGAGC ACTCATCACG
CGTTGCCTGT ATGAAAAAAA CGGGAAAGCC AAAACCTTTA AAATTGTGGA TGCAGGGATG
AACGACCTCA TCCGCCCCGC CCTCTACCAG GGCTATCATG AAATTATCCC GGTCAGAGAA
CACCCCTCCG GATCCTGCGT CACAGCGGAT GTTGTGGGTC CCATTTGTGA ATCCGGAGAC
TTCCTCGCCC AAAACAGGGA CATGCCGGAC GTGCGCCAGG GAGAACTCCT GGCCGTACTG
TCCGCCGGAG CCTATGGTTT TTCCATGTCT TCCAACTACA ATTCACGGCC TATGGCGGAA
GAAGTCCTGG TGGACGGGGA CCAATGGAAC GTCATTCGCA GCCGCCAAAG CTGGGAAGAC
CTCATCCGGG GAGAATCCAT TCCGGAATAA
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| Protein sequence | MHSFAYKNGT LYCENVNLQE LADKESTPLY VYSKQTILNH FHRLREALAP LNAEVAYAVK
ACSNIAILNL MARNGAGFDI VSGGELFRVL KAGGDPSKCT YAGVGKTEQE IRYALAQGIY
CFNVESEAEL RAINAIAASM GVKAPVAVRV NPNVEAGTHK YITTGKAENK FGVDFERIES
LYEMAARELP NLHLKGLQMH IGSQLTQAKP FLEAVRKVAP LAASLKEKHG IEFFSIGGGI
GIVYQGTLDS GVQEWWNEDC AQLTLSTYAQ AVVPTLQPLG LHIIVEPGRL IVGNAGALIT
RCLYEKNGKA KTFKIVDAGM NDLIRPALYQ GYHEIIPVRE HPSGSCVTAD VVGPICESGD
FLAQNRDMPD VRQGELLAVL SAGAYGFSMS SNYNSRPMAE EVLVDGDQWN VIRSRQSWED
LIRGESIPE
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