Gene Amuc_0711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0711 
Symbol 
ID6273876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp839064 
End bp840809 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content58% 
IMG OID642612763 
Productsodium/hydrogen exchanger 
Protein accessionYP_001877329 
Protein GI187735217 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4651] Kef-type K+ transport system, predicted NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCACG ATTTCAGCCT TATTCTCACT TTTGTCGGCG GATTGGCCGC TGCCCTTCTT 
TTCGGCCTTA TTGCCAGAAA ACTGCATTTA TCCCCGCTGG TGGGCTACCT GCTGGCCGGG
GTGGCGGTAG GGCCGTACTC GCCGGGATTT GTTGCGGATT CCCATACGGT GGAACAATTC
GCGGAGCTGG GCGTTATCCT GCTGATGTTC GGGGTGGGGC TCCATTTCCA TTTGAAGGAT
TTGATTGCCG TGCAAAAAGT GGCCGTGCCG GGAGCCGTTG TGCAGATATC CGTGGCTACC
GTGCTGGGGG TGCTGGTCGG GTGGATGTTC GGATGGTCCG CGATTTCTGG ACTGGTTTTT
GGCATGGCGA TTTCCGTGGC GAGTACCGTA GTGCTGACGC GGGTGCTGGA AGACAACCAG
AACCTCCATA CGCCCGGCGG CCATGTGGCC CTGGGATGGC TGGTAGTGGA AGACCTGTTT
ACCATTCTGC TGCTGGTTCT CATCCCCGCC GTGATGGAAG CGCGCCAGAG CGGCGCCGGA
GACTGGGGCG GCATTCTTTC CGAGCTTGGC TGGATGTTCG TCAAGCTGGC CCTGCTGGTG
GCCCTGACGC TGTTTGCCGG GAAAAAAGTC ATTCCGCTGG TGCTGCGGTA CGTGGCCCGA
ACGGGCGCGC GTGACTTGTT TACGCTGGCT GTGCTGGTCA TTGCGCTGGG CGTGGCGGTG
TGCTCCGCGG AATTCTTTGG CGCTTCCATG GTTTTGGGGG CGTTTTTGGC GGGGATGGTT
GTAGGCCAGT CGGACTTCTG CGCGCGCGCG GCGGCGGAAG CCATGTTGAT GAGGGATGCT
TTTGCGGTTC TCTTCTTCGT TTCCGTGGGG ATGATGTTTG ACCCGATGTC CGTGGGGGAT
TGCTGGCCTC TGGCCCTGGC AACGCTGGGG GTGGTGATGA TCGGCAAGCC GCTGGCGGCT
TATGTGGTTG TTCGTTGCCT GAGGCGGCCG GTGCCGCTGG CGCTGAGCGT ATCCGTGGCC
TTGGCTCAAG TGGGTGAATT TTCTTTCATT CTCGCCGGAA TAGGTCTCAT GTACAACATC
CTGCCTCCGG ATGCCAATCA GGCCATCATT CTGGCGGCTG TCGTCTCCAT TTCCTTAAAT
CCCATCCTGT ATCGGCAGAT TGGACCTGCA GTCAAATGGC TGCAAAAACG CGGCATAGGG
CTTGCGGACC CGGGGGGCGT GAACAGCATG GCCTTGCCCG CTCCGGATGC GCGGCGCGTG
GTATTGGTAG GGTTTGGCCC CACGGGGCGC ATTCTTAAGA GGATATTGAA TGACAACGGG
GTGGAAGTCA TCATCGTGGA AATGAACATA GACACGGTTA CCGCTATACG GGAGCAGGGA
GGGGATATTG TTTACGGGGA TGCCAGCCAG CGGGAAATTC TGCGCCATGC GGGCATTGAA
TATGCGGAAA GCCTGATTCT CTCCGCTTCC ATTCCGGACG CCAAGGAGAT AGTAGGCGTG
GCTCTGGAGC TTAACCCTCA TATTGACGTG ATGATTCACA CCAAGTACAT GAGGGACGTG
GATATACTGA AGGAAGCCGG CGCTTCCCAG GTTTTTTCCT CGGAATCGGA AGTAGCCCTG
TCCATGGCGG AATATTTCCT GCGGGAAGGC GGTGCGGACG ACGAACAGAT CGTTTCCGAG
CGCCAGCGCA TTCGCGCGGA GCTGGACAGG GAAATGCCCG GAGTTTCCGT TGCGGGCCAT
TCATAA
 
Protein sequence
MDHDFSLILT FVGGLAAALL FGLIARKLHL SPLVGYLLAG VAVGPYSPGF VADSHTVEQF 
AELGVILLMF GVGLHFHLKD LIAVQKVAVP GAVVQISVAT VLGVLVGWMF GWSAISGLVF
GMAISVASTV VLTRVLEDNQ NLHTPGGHVA LGWLVVEDLF TILLLVLIPA VMEARQSGAG
DWGGILSELG WMFVKLALLV ALTLFAGKKV IPLVLRYVAR TGARDLFTLA VLVIALGVAV
CSAEFFGASM VLGAFLAGMV VGQSDFCARA AAEAMLMRDA FAVLFFVSVG MMFDPMSVGD
CWPLALATLG VVMIGKPLAA YVVVRCLRRP VPLALSVSVA LAQVGEFSFI LAGIGLMYNI
LPPDANQAII LAAVVSISLN PILYRQIGPA VKWLQKRGIG LADPGGVNSM ALPAPDARRV
VLVGFGPTGR ILKRILNDNG VEVIIVEMNI DTVTAIREQG GDIVYGDASQ REILRHAGIE
YAESLILSAS IPDAKEIVGV ALELNPHIDV MIHTKYMRDV DILKEAGASQ VFSSESEVAL
SMAEYFLREG GADDEQIVSE RQRIRAELDR EMPGVSVAGH S