| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0709 |
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| Symbol | |
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| ID | 6273882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 836235 |
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| End bp | 836990 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642612761 |
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| Product | protein of unknown function DUF28 |
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| Protein accession | YP_001877327 |
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| Protein GI | 187735215 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGAC ATAATAAATG GTCTAAGATC AAGTACGTTA AGGCTAAGGA AGACGCCAAG
AAGGGCAAGG TTTTTGCCCG CTTTGCCCAT GAAATCATGC TGGCCGCCAA AAGCGGCGGC
GGAGATCCTG ATCTGAATCC GCGCCTGCGC GCCGCCATTG ACGGAGCCAA GGCCGTGTCC
ACCCCCAAGG AAAATATTGA ACGCGCCATC AAAAAAGGCA CCGGGGAACT GGGAGGAGCT
ACCATCCAGG AGATTACCTA TGAAGGCTAC GGCCCCTCAG GCACGGCTTT CCTGATTGAA
GTGGCGACGG ACAACACAAA CCGTTCCGCT TCCGAGCTGC GTACCCTGTT CACCAAAAAC
GGAGGCAGCA TCGGTACGCC CGGTTCCGTG GCTTACCAGT TTGAACGCAA GGGAGAGGCC
CGCATCATGG CGGAAGGTCT TACGGAGGAT TCCGCCATGG ATCTGGCGCT GGAATGCGGC
GCGGATGATG TGGAACAGGG GGATTCCGAC AATGAATGGG TGTTTGTTAC GAGCCCAACG
GAGTTGAACA ACGTGTGCGC CGCCCTGCGT GAAGCCGGAC ATACGGTAAT TTCCATGAAG
CTGATTTCCG TGGCGCAGAA TGCTTCCGTG ATTAATGATC TGGAAACGGC AAAGGCCGCC
CTGCGCCTGT ATGAAGCGCT GGACGACTAT GATGACGCGC TGAACGTCTT CTCCAATTTC
GATGTGGCGG AAGAAATCCT TGAGCAGCTT GGTTAA
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| Protein sequence | MSGHNKWSKI KYVKAKEDAK KGKVFARFAH EIMLAAKSGG GDPDLNPRLR AAIDGAKAVS
TPKENIERAI KKGTGELGGA TIQEITYEGY GPSGTAFLIE VATDNTNRSA SELRTLFTKN
GGSIGTPGSV AYQFERKGEA RIMAEGLTED SAMDLALECG ADDVEQGDSD NEWVFVTSPT
ELNNVCAALR EAGHTVISMK LISVAQNASV INDLETAKAA LRLYEALDDY DDALNVFSNF
DVAEEILEQL G
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