| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0686 |
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| Symbol | |
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| ID | 6273930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 806102 |
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| End bp | 808633 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642612738 |
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| Product | ABC transporter related |
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| Protein accession | YP_001877304 |
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| Protein GI | 187735192 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.409076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGT TTTCTAATTT TCAAAGTAGA CCGGATCACA TTGAAATCCG TGGCGCCCGT
GTTCATAATC TGAAAAATAT TGATTTAGAT ATCCCGTTGG GCAAGCTGGT AGGAATTACG
GGGGTGTCAG GATCAGGAAA GTCCTCTTTG GCTTTGGGCG TACTTTATGC CGAAGGTTCC
CGCCGCTATT TAGAGGCATT GTCCGCCTAT ACTCGGCGGC GTATAATACA GATGGCAGAG
GCAAAAATTG ACAGTATAGA ATATGTCCCG GCTGCCCTTG CTCTTCGTCA ACGTCCCGCT
GTTCCCGGTG TCCGCAGTAC ATTTGGAACG GCTACCGAAC TTTTGAACTC AATCCGGCTT
ATGTTTTCCC GCTTGGGAAA TCACCGCTGT CCCAATGGAC ATTTGCTTTC GCCATCGGTC
AACGTCGCGG CAATGCGTCC CCTTGTCTGC TCTGTATGCG GAGCGGTATT TGACGGTCTC
AGCGCAGAAA GTTTTTCATT CAATGGCCAA GGAGCGTGTC ACACCTGCGG AGGAACTGGA
ATTGTTCAAG CAGTAGACGA AACAACTTTA GTGCCTGACG AGTCCCTTTC CATTGACGAA
GGAGCAGTTG CGCCGTGGAA TTCTTTGATG TGGTCGCTGA TGACTAACGT ATGCCGGGCG
ATGGGCGTTC GAACCGATGT ACCTTTTTCG GAGTTGACAG AACAGGAACG GGAGATCGTC
TTTCATGGTC CGCCAGAAAA GAAACATATC CTTTATAAAG CAAAGAGCAG CAATCAAGCG
GGAGAAATGG ATTTTACCTA TTATAACGCT GTTTATACCG TGGAAAATGC CCTTGCTAAA
GTTAAAGACG AAAAGGGAAT GAAGCGGGTA GAAAAATTTT TGAAGCGGAA CGCCTGCCCG
AATTGCGGAG GCTCCCGGCT CAATAAGCGG GCGTTATCAA GTCTGCTATG CGGAAAAAAC
CTTGCGGAAA TCACCAAAAT GACATTAAGC GATTTAACCG CTTGGATAAA GACGATTTCT
GCTTCCATGC CGGAAGAACT AAAAACAATG GCGGAAAGTA TCTGCGGTCA ATTTCTGCAT
GTATCAAAAC GTCTTTCTGG CTTAGGTCTG GATTATATTA CCCTTGACCG GGCCGGAACA
ACGCTTTCCA CCGGAGAGCG TCAACGCGTG CAGCTTGCAA GGGCTGTACG AAACCGTACC
ACAGGTGTTC TCTATGTGTT GGATGAACCG TCTATTGGCT TACACCCAGC AAATGTAGAT
GGGCTGTTGG GCGTTATAGA TGATCTTATT GCTCATGGTA ATTCTGTGAT ACTGGTAGAC
CATGATGTGC GAGTTTTAAA GGCTGCTGAT TGGTTAATTG AAATGGGCCC AAAAGCTGGA
GAGCATGGCG GACAGATAGT TGCACAGGGA ACGATTAAAG CAGTAGCAAA AAAAACGAGT
TCACTCATCG TTGGATTTTT GGCAGACAAG GAAAAACCGG TTATCCGAGA AACGGCAACG
CCGGAGGCCA TGTTTGCACA TGGGCATATC AAACTGTCTA CTGCTCCTTT GCATACAGTC
CATGCCCTTG ATTTAGACAT CCCCAAAGGT CGGCTGATTG CTGTAACAGG AGTTTCCGGT
TCCGGCAAAA CAACACTGAT TTTGGAAAGT CTTATTCCCG CCATAGAAGC TGCCATAGCG
AAAGCGCCGA TGCCTGACCA TGTGAAAAGC GTGGAGGTAG CCGGTATTGA ACGTATAAAT
CTTATTGATG CAACACCTAT TGGCGTGAAT GGCCGTTCTA CCGTTGCAAC ATACAGCGGG
ATATTAGATG ATTTGCGCCG GCTTTATGCA GCTATCCCGG AAGCAAAATC AAAAGGGTAT
AAAGTAAGTG ACTTTTCCTA TAATACTGGG TCACTCCGTT GCTTTGGTTG TGACGGAACA
GGTCAAATTA CAATGGATGT GCAATTTCTC CCGGACGTGG ATATCATCTG CCCGGACTGC
GGCGGCTCCC GCTATGGAAA AGAAGCGGAG GCAATTCGTT ATCGCTCTAA AAAAGACAAG
GTGAACGCAC CCGGTATTTC TCTGCCTGTA CTGATGGGGA TGACCGTGGA GCAGGCGTTA
GAACGCTTAT GTGACGTGAA AAAGGTTAAA GAAAAGCTCC AAATTCTTTC TGATTTAGGT
TTGGGTTATT TAACTTTAGG CGAAGCAACT CCTGCCCTGT CCGGCGGTGA GGCACAGCGG
CTAAAGCTGG CGGCTGAAAT GGAAAAGGCA CAGGACGACG CCATATTTGT ATTTGACGAG
CCAACGATTG GACTTCATCC GCTGGATGTA CGGATACTAA TTGGCGTATT TCAGAAACTT
GTTGATGCCG GTGCAACAGT TATCGTCATT GAGCATGATT TAAACATGAT TGCCAATTCC
GATTATGTGG TCGATATGGG GCCGGGAGGC GGCAAAGCAG GAGGACAAAT TGTAGCAACT
GGTTTGCCTA AAAAAATCGC TGAAACGGCT GAAAGCCTTA CAGGAAAATA TCTATGTGAA
ATAATTTCAT AG
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| Protein sequence | MSQFSNFQSR PDHIEIRGAR VHNLKNIDLD IPLGKLVGIT GVSGSGKSSL ALGVLYAEGS
RRYLEALSAY TRRRIIQMAE AKIDSIEYVP AALALRQRPA VPGVRSTFGT ATELLNSIRL
MFSRLGNHRC PNGHLLSPSV NVAAMRPLVC SVCGAVFDGL SAESFSFNGQ GACHTCGGTG
IVQAVDETTL VPDESLSIDE GAVAPWNSLM WSLMTNVCRA MGVRTDVPFS ELTEQEREIV
FHGPPEKKHI LYKAKSSNQA GEMDFTYYNA VYTVENALAK VKDEKGMKRV EKFLKRNACP
NCGGSRLNKR ALSSLLCGKN LAEITKMTLS DLTAWIKTIS ASMPEELKTM AESICGQFLH
VSKRLSGLGL DYITLDRAGT TLSTGERQRV QLARAVRNRT TGVLYVLDEP SIGLHPANVD
GLLGVIDDLI AHGNSVILVD HDVRVLKAAD WLIEMGPKAG EHGGQIVAQG TIKAVAKKTS
SLIVGFLADK EKPVIRETAT PEAMFAHGHI KLSTAPLHTV HALDLDIPKG RLIAVTGVSG
SGKTTLILES LIPAIEAAIA KAPMPDHVKS VEVAGIERIN LIDATPIGVN GRSTVATYSG
ILDDLRRLYA AIPEAKSKGY KVSDFSYNTG SLRCFGCDGT GQITMDVQFL PDVDIICPDC
GGSRYGKEAE AIRYRSKKDK VNAPGISLPV LMGMTVEQAL ERLCDVKKVK EKLQILSDLG
LGYLTLGEAT PALSGGEAQR LKLAAEMEKA QDDAIFVFDE PTIGLHPLDV RILIGVFQKL
VDAGATVIVI EHDLNMIANS DYVVDMGPGG GKAGGQIVAT GLPKKIAETA ESLTGKYLCE
IIS
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