Gene Amuc_0685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0685 
Symbol 
ID6273932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp805480 
End bp805983 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content48% 
IMG OID642612737 
ProductConserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein 
Protein accessionYP_001877303 
Protein GI187735191 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.957986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA TCAATATAGG TCAGGCGACG GCTATCACCT TTCCCAATCC TCTCGTGTTG 
GTTTGCACCA AAAAAGAGAA CGGTATGCTG AACATGGCTC CCGTTTCATT CTTCATGTAC
TCCTCGTTTA ACCCTCCTAT GCTGGCCTTT GCAATGGGTA AAACCGCCAA TTCCGGCGAA
AATATCCGCA AGACCGGCAA AGCCGTACTC GCTGCCCCTG GCGTCAGCTT GAAAGATGCG
GTCATGGCTT ACGGCTCTAA AAACGGCGGG CAGATTGACA AACTGAAGGA ATTTCCAGTC
GCTCTGCAAA ACATTGACGG AACAGACATT CAGATCCCGG AGGACAGCCC TATTGCTTTT
GTGGCATCGC TAGCTGAAAC TGTGGAGTCT GGCAATCATT ACCTGTATCT CTGCAATATT
GACAAAATAG TGGCGGACAA AACAAAAGAA GCCCTGTTCG CATGGAATGG TTATGCCAAA
GTTGCCCCGG CACAGGAAAA ATAA
 
Protein sequence
MKEINIGQAT AITFPNPLVL VCTKKENGML NMAPVSFFMY SSFNPPMLAF AMGKTANSGE 
NIRKTGKAVL AAPGVSLKDA VMAYGSKNGG QIDKLKEFPV ALQNIDGTDI QIPEDSPIAF
VASLAETVES GNHYLYLCNI DKIVADKTKE ALFAWNGYAK VAPAQEK