Gene Amuc_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0680 
Symbol 
ID6273943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp798804 
End bp799688 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content56% 
IMG OID642612732 
Producthypothetical protein 
Protein accessionYP_001877298 
Protein GI187735186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCC CGCAGAATAC GATCGCCCTG GTTTTCGACT ACGACCAGAC CCTGAGTCCC 
TTCTACATGC AGGATCAGGC CATCTTCCCG GAATTCGGCA TTTCTCCGCA GGAATTCTGG
ACCAGGTGCA ACGCCACCGG AGAAAGAGAA GGCTGGGACG GAGAACTGAT TTACATGAAA
AGCCTGCTGG ACGCCCTTTC CCTGGACCGC GTCAGCAACG CCCGGCTTAC CCAGCTTGGA
GAGCGCCTCA CCTTTTACCC CGGTTTGCCG GACTTTTTTA ACGCGTTCCC GTCCATGACC
CTCTCCTCCC TTCATACGGA TCTGGGCATC AGCATTGAAT ACTATATCAT CTCCTCCGGT
TTGAAAGCCC TGATTGACGG TTCCGCCCTG CGCCCTTATT TCAAGGCCGT ATTCGGATGC
GAATTCAGCG AGGAGAACGG CTACATCAAT TTTCCCAAGA GAGTCATTTC CCACACCACG
AAAACCCAGT ACCTTTTCCG CATCAACAAG GGAATGCTGG ATTACGACCA GGACGTAAAC
GACCACATGC CGGAAGACAT GCGCCCCATT CCTTTCGCCA ACATGATTTA CATCGGCGAC
GGCCCTACGG ACGTTCCCTG CTTCACCGTC ATGCGCCGGA ACGGAGGCCA CGCCGTAGCC
GTATATAATC CGGAAGATGA AACCGGCCGC AGTTTCCGCA AATGCTATAA TCTGGCCTCC
AATTCCGACC GCGTGAATTT CATCGCCCCG GCGGATTACA CGCCCGGCAG CCATCTCACC
CGCCTGCTGT CCGGCATGGT CACGGATATC GCCAACGGCA TTGTGCGCCG CCGGGACCGG
GCTCTGGCGG ATTCCTGTAT TGCGGCTCCT TCCTTTTCCA AATAA
 
Protein sequence
MSSPQNTIAL VFDYDQTLSP FYMQDQAIFP EFGISPQEFW TRCNATGERE GWDGELIYMK 
SLLDALSLDR VSNARLTQLG ERLTFYPGLP DFFNAFPSMT LSSLHTDLGI SIEYYIISSG
LKALIDGSAL RPYFKAVFGC EFSEENGYIN FPKRVISHTT KTQYLFRINK GMLDYDQDVN
DHMPEDMRPI PFANMIYIGD GPTDVPCFTV MRRNGGHAVA VYNPEDETGR SFRKCYNLAS
NSDRVNFIAP ADYTPGSHLT RLLSGMVTDI ANGIVRRRDR ALADSCIAAP SFSK