Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0664 |
Symbol | |
ID | 6273974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 781538 |
End bp | 782557 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642612716 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_001877282 |
Protein GI | 187735170 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCCGA CCTCTCGCAC ATCATTTGCA GCCGTGCTCG GCATTGTGGG CATGTTTCTG CTGACGTTGT CCACGGCCTT CGGATGGAAT CCGGAAATCA TTAATGGAGT GCAGTATATT CCGATGTCCG AAGTGCGCAC CCATTACAAA CTGACCAGGG AACGCACGGA AGGGCGGCAG AAAGTTTACG AGGTGCCGGA AAAGATTCAA ATCCGTATCC AGGCGCGCAG CCAGGAGATG TTCATGAACA ACATGAAGTT CGTGCTATCC TATCCTGTGG CTGACCATCC CTCCAAGGGG CTGATGGTTT CCAATATGGA CCTGCACAAA ATCATTGACC CGGTTCTGCG CCCCACTTAC ATCGCCAACC GCCGCAGTTT CAACACAGTA GTCATTGATC CCGGCCACGG CGGCCATGAC AGCGGCACGC GTAACCGCAT CAGCAGGGAA GCGGACATCA ACCTTTCTGT GGGCAAAAAG CTGCGCGACC GCCTCAAGGC CATGGGCTAC CAGGTGGTCA TGACCCGTGA CACGGACAAC TTCATTGCCC TTCAGGACCG CGTCCGCATT GCCAACAGGC ACAATAATGC CATCTTCATC AGCATCCACT TCAATGACGG AGGCTCTTCT GCCCGCGGGG TGGAAACCTT CACGCTGGCG CCCGCGGGCA CTTCCTCCTC CATGTCCCGC AATATCCGCC ACGACGCCCT GCAGGGCAAC GCCCAGGACA GCATGAACAT CGCCCTGGCT ACAGCCGTCC AGGGGCACAT GCTGAAAGGA CCGCTTGCCA TTAAGGAGGG CATTTCCATG GTTGACCGCG GCATCAAGCG CGCGCGCTAT TCCGTGCTGT GTACCATCAA GCATCCCGCC ATTCTGGTGG AAGGCGGGTT CATGTCCAAC CCGCAGGAGG CCCTGCTCAT CGCCACGGAG CGTTATCAGA ATTTCATGGC CTCTTCCCTG GCCGCCGCCG TGCACCAGTA CCGCACCGCC CTGGGCCAGC AAGTGCGCAG AACGCGCTGA
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Protein sequence | MYPTSRTSFA AVLGIVGMFL LTLSTAFGWN PEIINGVQYI PMSEVRTHYK LTRERTEGRQ KVYEVPEKIQ IRIQARSQEM FMNNMKFVLS YPVADHPSKG LMVSNMDLHK IIDPVLRPTY IANRRSFNTV VIDPGHGGHD SGTRNRISRE ADINLSVGKK LRDRLKAMGY QVVMTRDTDN FIALQDRVRI ANRHNNAIFI SIHFNDGGSS ARGVETFTLA PAGTSSSMSR NIRHDALQGN AQDSMNIALA TAVQGHMLKG PLAIKEGISM VDRGIKRARY SVLCTIKHPA ILVEGGFMSN PQEALLIATE RYQNFMASSL AAAVHQYRTA LGQQVRRTR
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