Gene Amuc_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0648 
Symbol 
ID6274142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp761966 
End bp762745 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content60% 
IMG OID642612700 
Productbeta-lactamase domain protein 
Protein accessionYP_001877266 
Protein GI187735154 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGT TTTGCGTGTT GGGCAGCGGC AGCGGGGGAA ATGCCACCAT TGTCAGGGCG 
GGGGAAACCG TCCTGCTGGT GGATGCCGGG TTCAGCGCCG CCAGGCTGCG GGATAAGATG
AAGTCCGCCG GAGTGGAGCC GGATGAGCTG GACGCCATTC TGCTTACCCA CGAACACGCG
GACCACATGA AAGGCGTGCA CCAGTTCACC AGAAAGCATG CCGTGCGTGT TTACGCCACC
CGCCATACGG CCATGTGCGT CCAGGAAAAA GCGCCGGAGG CTCCCTGGGC CTATTTTGAA
AAGGGGCAGT CTTTCAGAAT AGGGGATATC GTCATTACTC CCTTCCCCAC TTACCATGAC
GCCGTGGACC CGGTGGGATT CAAATTTGAA ACGGAGCGGT CCAGCCTGGG TTTCATTTCC
GATACAGGGC AGGCTCCCGG CTGCATAGCG GAATACCTTG CCATGGTGGA CAGCCTGGTG
GTGGAATCAA ACTATGATCC GGACATGCTG GCGGCCACTC CCAGAAGGCC CTGGCCGCTG
AAGCAGCGCA TCGCTTCTGC GCACGGTCAT CTCTCCAATG GGCAGGCGTG CGACCTGCTG
AGGCGGATTG CTCATGGAGC CTTGAAAAAC GTGGTGCTGG CCCATCTGAG CGCAGAAAGC
AATTCTCCGG CATTGGCAGA AAGCCTGATG CGTGATACCC TGCATGACAT GGGGCTGGCT
TCCACCTCCC TGTTCTGCGC CAGCCAGGAC TCCTGCCTGC CGTGGATACG GGTCTGCTGA
 
Protein sequence
MMQFCVLGSG SGGNATIVRA GETVLLVDAG FSAARLRDKM KSAGVEPDEL DAILLTHEHA 
DHMKGVHQFT RKHAVRVYAT RHTAMCVQEK APEAPWAYFE KGQSFRIGDI VITPFPTYHD
AVDPVGFKFE TERSSLGFIS DTGQAPGCIA EYLAMVDSLV VESNYDPDML AATPRRPWPL
KQRIASAHGH LSNGQACDLL RRIAHGALKN VVLAHLSAES NSPALAESLM RDTLHDMGLA
STSLFCASQD SCLPWIRVC