| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0645 |
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| Symbol | |
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| ID | 6274151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 758906 |
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| End bp | 760255 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642612697 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001877263 |
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| Protein GI | 187735151 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACC CGGAACGCAC CATAGCCGCA CAGGCCACCG CCGCAGGACA GGGGGCCATC
GCCGTCATCC GCATGAGCGG TCCCGGCTGC ATGGACATCC TGAAACAATG CACCCCTGCG
GCTTTCACGG AACGCCTCCG GCCGCGCCGC GCGACGCTGG TCTGCATCCG GGACGCGGAA
GGTGCCGCCA TTGACCAGGC GCTTGTCACC TGGTTCCCCG CCCCGGCCAG TTATACGGGG
GAAGATACCG CGGAAATCTC CTGCCATGGC GGCATGCTGG TGACGGACCG CCTGCTGAAA
CGCCTCTACC AATGCGGGGC CTCCCCAGCG GAACCGGGAG AATTTACAAA AAGGGCCTTT
CTGAACGGGC GCATGGACCT GACCCAGGCG GAAGCCGTGA TGGATGTGAT TTCCGCCGGG
AGCGACCTGG CCCTGAAAGC CGCGCAAAGC CAGCTGGACG GAGGCATCGG CGCCCAGGTG
GACGAACTGA AAGACAACCT GGTTCATGTG CTGGCCCACA TTGAGGCCTA TATTGATTTT
CCGGATGAAG ACATTTCCCC GGACACCGCC TCCGATCTGC TGGCGCGCCT CCGGAACATG
GAGGAAAAAC TGGACACTCT CCTCAAAACT GCCGAAGGCG GACGCCTGCT GCGGGAAGGC
ATCCGCACGG CGATCGCCGG ACCTCCCAAC GTGGGAAAAT CCAGCCTGCT GAATACCCTG
CTGGGATATG ACCGGGCCAT TGTCAGCAAT ATTGCCGGTA CCACGCGGGA CACGGTGGAA
GAATCCATTC AGCTGGCCGG GCTGGCCCTG CGGCTGATTG ATACGGCCGG TGTCCGCGAA
TCTTCCGACG TCATTGAACA GGCAGGCATT ACCCGCACCA ACAGGGCTCT TGAAACCGCG
GATCTGGTTC TGGAAGTGGC GGATGCCTCC ACGCCCCGGG TCAAAGACTT CCCCGCCCCT
GTTCTCACCG CGCCCCGGCT GCTTATTCTG AACAAGTGCG ACCTGGGAAT CCATCCGGAC
TGGAAGGCCG TGCCCGGCAT CCGGTTTTCC TGCGCCACCG GGGAAGGAAG AAAGGAATTG
GAGGAAGCCA TTATCCAGGC CTTTTCCTCC TCCCTGCCCG GTGAAACGGG CAGCTCCCTG
GTAGCCATCA ATGCCCGGCA CCAGCATGAA CTGGGCCTCT GCCGGGAGCA TGTCCGGCTG
GCTTCGGAAT CCATCTCCCG CCAGGAAAGT CCGGAATTCA CAGCCCTGGA ACTGAGAGAG
GCCCTGACGC ACCTGGGAGA AATCACCGGA GCCGTGGATA CGGAGGACGT GCTGGGCGCC
ATTTTTTCCT CCTTCTGCCT GGGGAAATAA
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| Protein sequence | MTDPERTIAA QATAAGQGAI AVIRMSGPGC MDILKQCTPA AFTERLRPRR ATLVCIRDAE
GAAIDQALVT WFPAPASYTG EDTAEISCHG GMLVTDRLLK RLYQCGASPA EPGEFTKRAF
LNGRMDLTQA EAVMDVISAG SDLALKAAQS QLDGGIGAQV DELKDNLVHV LAHIEAYIDF
PDEDISPDTA SDLLARLRNM EEKLDTLLKT AEGGRLLREG IRTAIAGPPN VGKSSLLNTL
LGYDRAIVSN IAGTTRDTVE ESIQLAGLAL RLIDTAGVRE SSDVIEQAGI TRTNRALETA
DLVLEVADAS TPRVKDFPAP VLTAPRLLIL NKCDLGIHPD WKAVPGIRFS CATGEGRKEL
EEAIIQAFSS SLPGETGSSL VAINARHQHE LGLCREHVRL ASESISRQES PEFTALELRE
ALTHLGEITG AVDTEDVLGA IFSSFCLGK
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