| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0642 |
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| Symbol | |
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| ID | 6274157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 754979 |
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| End bp | 755863 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642612694 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001877260 |
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| Protein GI | 187735148 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.989271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCTGT TTCTGGCAGG TCCCACCGGA TCGGGCAAAT CCGCGGTAGC CGTGGAACTG
GCGGAGATGC TGGACGCAGA AATCGTCAGT TCCGACGCTT ACCAGGTGTA CCGGGAGCTG
CCCATCCTGA CGGCGGCGCC TTCCCCGGCA GACCGGGAAC GGGTCCCCCA CCACATGGTT
TCCATCATTC CGGTCCAAAA GAACTGGAAT GCCACGGAAC ACTACCACCG CGCCATGCGC
TGCATGGAAG AAATTCACGC ACGCGGAAAA ATCGCCATCG TCACGGGCGG TTCCGGCCTG
TACTTCAAAT TCCTCTCCCA CGGCCTGTCG GAAGCGCCGC CGGGGGACGC TGCTCTCCGC
GCCGCTTTCG CGAACTGTTC CACGGAAGCG CTATACGCCA GACTCTCTTC CCTGGATCCG
GAAGGAGCGG CCTCGACGGA TGCCTCCAAC CGGCGTTATG TGGAACGCAA TCTGGAAATC
GTCCTTGCCG GAGGAAAACC TCTTTCCTTC TGGAAGAGGA ACTGGTTGAC CCCGCCGCGC
GGGCCCGGCT GGGTCATCAG CAGGGATGTT CCTGAACTGG ACGAAAGAAT AGCCCACCGT
GCCGCACGCA TGATGCAGGA GGGGGCCGTG GAGGAAACGG CTTCCCTCGG CCCATGCTCC
GCCACAGCGG AACGCACCCT GGGCCTGGCG TTGATACGAA GCATGCTGCG CGGGGAAATC
TCCCGTGAAA ACTGCCAGGG CCAGCTGGCC CTCGCCACCC GGCAATACGC CAAACGGCAG
CGCACCTGGC TGAAACGCGA ACAATGGCTC CGGAAACTTC CGGCTTCCCC TTCCGACTCT
CCCCGGGCTC TTGCAGAACG CATCATGGAA GAACTGGGGC ATTAA
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| Protein sequence | MTLFLAGPTG SGKSAVAVEL AEMLDAEIVS SDAYQVYREL PILTAAPSPA DRERVPHHMV
SIIPVQKNWN ATEHYHRAMR CMEEIHARGK IAIVTGGSGL YFKFLSHGLS EAPPGDAALR
AAFANCSTEA LYARLSSLDP EGAASTDASN RRYVERNLEI VLAGGKPLSF WKRNWLTPPR
GPGWVISRDV PELDERIAHR AARMMQEGAV EETASLGPCS ATAERTLGLA LIRSMLRGEI
SRENCQGQLA LATRQYAKRQ RTWLKREQWL RKLPASPSDS PRALAERIME ELGH
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