Gene Amuc_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0641 
Symbol 
ID6274160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp754155 
End bp754895 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content54% 
IMG OID642612693 
Producthypothetical protein 
Protein accessionYP_001877259 
Protein GI187735147 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.726256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCAA AAAAAATTAA GGCCTGTATC CTCTTTCTTC TTTTAACCGT TCCGGCCGCA 
TTAGGCGCCG TCTGGTGCGC CAAACACGCC TACCGCTACC ATTTGGCTGT CCATCCCCTT
CCCTATTCCC CGGAACAGGG CGCCCTGCTG GAAAAACACC GGCAGGACAA ACGCAATGCC
CGGCTGAATC CCCATGCCCC CGTGTTGTTC CTGGGTTCCT CCACCATGGA ATTCTGGCTG
AAAGAAGGGA AACATTCCTG GGAAACCTGG TTTTCCCCTC TGGGATGCCT CAACCTGGGA
ACCAGGAGCG AGACCACGGG CAACCTGCTC TGGCGCCTCA ATGACGGCCT GACAAGCCCG
CTGGCGCCCA GAATCATCGT CCTGTATTCG GGAGTCAACA ATCTGGGAGT ACAAAAAAGC
CTGGGATGGA CGGCTTTTCA GGGAAACGTG GCCATCGTCA AAAAAATCAG GGAGATTTAC
AGCCCGGAAA CGACCGCCAT CATTGTCATT CCCCCGCTCA TCGCACAAAA AGGGTCGCGC
ATGGAAACCT TCAGGAATTG TCTGCTGCAA CACGACTTTG GAGAAAATGT CCATGTCCTC
CCCCTCCATT TCTTCCTTCC GGGAAAAGAC GCCAGCCTTT ATACTTGGGA CGGCCTCCAT
CTCAACGCCC TGGGATATGA AGCCATTTCG CCTCCGCTTT TCCGCTTCCT CCAACAGCTT
TTAAGCAGGA GCAGCTTTTA G
 
Protein sequence
MFPKKIKACI LFLLLTVPAA LGAVWCAKHA YRYHLAVHPL PYSPEQGALL EKHRQDKRNA 
RLNPHAPVLF LGSSTMEFWL KEGKHSWETW FSPLGCLNLG TRSETTGNLL WRLNDGLTSP
LAPRIIVLYS GVNNLGVQKS LGWTAFQGNV AIVKKIREIY SPETTAIIVI PPLIAQKGSR
METFRNCLLQ HDFGENVHVL PLHFFLPGKD ASLYTWDGLH LNALGYEAIS PPLFRFLQQL
LSRSSF