Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0641 |
Symbol | |
ID | 6274160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 754155 |
End bp | 754895 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642612693 |
Product | hypothetical protein |
Protein accession | YP_001877259 |
Protein GI | 187735147 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.726256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCCAA AAAAAATTAA GGCCTGTATC CTCTTTCTTC TTTTAACCGT TCCGGCCGCA TTAGGCGCCG TCTGGTGCGC CAAACACGCC TACCGCTACC ATTTGGCTGT CCATCCCCTT CCCTATTCCC CGGAACAGGG CGCCCTGCTG GAAAAACACC GGCAGGACAA ACGCAATGCC CGGCTGAATC CCCATGCCCC CGTGTTGTTC CTGGGTTCCT CCACCATGGA ATTCTGGCTG AAAGAAGGGA AACATTCCTG GGAAACCTGG TTTTCCCCTC TGGGATGCCT CAACCTGGGA ACCAGGAGCG AGACCACGGG CAACCTGCTC TGGCGCCTCA ATGACGGCCT GACAAGCCCG CTGGCGCCCA GAATCATCGT CCTGTATTCG GGAGTCAACA ATCTGGGAGT ACAAAAAAGC CTGGGATGGA CGGCTTTTCA GGGAAACGTG GCCATCGTCA AAAAAATCAG GGAGATTTAC AGCCCGGAAA CGACCGCCAT CATTGTCATT CCCCCGCTCA TCGCACAAAA AGGGTCGCGC ATGGAAACCT TCAGGAATTG TCTGCTGCAA CACGACTTTG GAGAAAATGT CCATGTCCTC CCCCTCCATT TCTTCCTTCC GGGAAAAGAC GCCAGCCTTT ATACTTGGGA CGGCCTCCAT CTCAACGCCC TGGGATATGA AGCCATTTCG CCTCCGCTTT TCCGCTTCCT CCAACAGCTT TTAAGCAGGA GCAGCTTTTA G
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Protein sequence | MFPKKIKACI LFLLLTVPAA LGAVWCAKHA YRYHLAVHPL PYSPEQGALL EKHRQDKRNA RLNPHAPVLF LGSSTMEFWL KEGKHSWETW FSPLGCLNLG TRSETTGNLL WRLNDGLTSP LAPRIIVLYS GVNNLGVQKS LGWTAFQGNV AIVKKIREIY SPETTAIIVI PPLIAQKGSR METFRNCLLQ HDFGENVHVL PLHFFLPGKD ASLYTWDGLH LNALGYEAIS PPLFRFLQQL LSRSSF
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