| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0637 |
|---|
| Symbol | |
|---|
| ID | 6274169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 750079 |
|---|
| End bp | 751239 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642612689 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001877255 |
|---|
| Protein GI | 187735143 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 0.948946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCCT ATGAAATGGC CTGCAGCCTG AGCTCCCTGG ACTGGGATAT CCACGTCCTC
ACCCGCCCGC TGGATTCACC GGATGAGTCC TTCCGCTCCC ACCAATACAG CCCTCTCACA
ACCCTGCCGG ACACCCTGAC GAAGGACAGT GCCCGTTTAA GGGAATACCT GGACGGGTTT
CTGAAAGATT TCCGGCCGGA TGTTATTATC TACCACTCCT GGGCGGACTG GTGCCGGGAA
GAATTGCTGG ACGCGGCACG GGATTCAGGC ATTCCGTTTT TCCTCCGCTC CCATGGTGCA
GCTACCAATT TCCGCTCTTT TTTCCGCTTC AATTACCCTC CTTTCTTCGG CCTGAAAAAA
TGGCTCTGCT CCTTTTTTCA AGTACGCAGG GATATCCTCA ACGTATGCCG GAAATCACCG
TTAAACCGTC TCGTTTTTCT CGATCCTTAC GGGACACTGT TCAAGAGCTT TGATTATTAC
TGCGCATCCA GAAGCAAACT TGCCCATTAC TCCTGCATTC CCAACACATT CCCGGCTCTG
AAAAGAACCG CTCCTTTTTT CCGGGAAAAA TACGGACTTT CCTCCGCCCC CGTTTTTACC
TGCCCTGCCG GCGCCAGCAT GAGGAAACGG CAGCTTCTCT TCATCCGCCA TGTGAAACGC
TCCCGTCTGC GGCATATCAT TTTTCTTTTT CTGATTCCCC AGCACAATGC CTACGCGGAA
CAAATGGAAC AAGCCATCGG GGATGACCCC AGATTCAGGA TTCTCTACAG GCTCCCCCGT
TTGGAAGTAG AAGCCGCCAT TATGGAAAGC GATGCCGTTT TCCTTTACTC TTATCAGGAA
CAGCAGCCCC TCTCCATTCT GGAGGCGATG TCATGCGGCG TTCCCTGGTT CGCTCCGGAC
GCAGGAGCTC TTTCCACCCT GGAGGGGGGA ATCGTCCTGA AAAACACTTC CCCCTCCGTG
CTGGAAAAAG CCGTGGAATC GTTGACGGAC GAAAAAACAC GCAAACTACT GGGGAGTAAA
GGCCGCCGGC AATGGGAAGC CTGTTTCGCC CCCGACGCAG TAAACCAGGA ATGGGAGCAA
CTGCTTTTTT CCTCCATCCG CCCGGAAGGA AAGCCTCCGT TCGCGTCTTC CATCGTCCGG
GAGCATTTAC CCACCTGCTA A
|
|---|
| Protein sequence | MAAYEMACSL SSLDWDIHVL TRPLDSPDES FRSHQYSPLT TLPDTLTKDS ARLREYLDGF
LKDFRPDVII YHSWADWCRE ELLDAARDSG IPFFLRSHGA ATNFRSFFRF NYPPFFGLKK
WLCSFFQVRR DILNVCRKSP LNRLVFLDPY GTLFKSFDYY CASRSKLAHY SCIPNTFPAL
KRTAPFFREK YGLSSAPVFT CPAGASMRKR QLLFIRHVKR SRLRHIIFLF LIPQHNAYAE
QMEQAIGDDP RFRILYRLPR LEVEAAIMES DAVFLYSYQE QQPLSILEAM SCGVPWFAPD
AGALSTLEGG IVLKNTSPSV LEKAVESLTD EKTRKLLGSK GRRQWEACFA PDAVNQEWEQ
LLFSSIRPEG KPPFASSIVR EHLPTC
|
|---|
| |