| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0631 |
|---|
| Symbol | |
|---|
| ID | 6274184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 741529 |
|---|
| End bp | 742659 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642612683 |
|---|
| Product | FAD-binding domain protein |
|---|
| Protein accession | YP_001877249 |
|---|
| Protein GI | 187735137 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 0.346009 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTG AACCATACGG CAAAAAAAAT CCGTTTCCCG CTCCCGTCCT CTCCGTCAGG
CATATCACCG GGGAAGGCAG CCCCAAGGAA ACCATCCACA TTGAATACAG CCTGGACGGT
TCCGGGATGA ATTATATTGC CGGGGACGCC CTGGCCGTCA TTCCCGCCAA TGACCCCTCC
CTGGCGGACG CCCTGATTGA CAAGCTCGGC CTCAGCCCGG ATTCCCAGGT TCCCACGCCC
GAAGGGGAAA CCGCAAGCCT GAAAGACGCC CTGGTTCACT GCTATGACAT TACCAATGTC
AACAAAGCCC TGCTGACCAA GTGGGCCGCC GCCTCCGGCA GCCAGGAGCT GGACACGCTT
CTGGCCGGGG ATAAGGACGC CCTCAGCGAT TTCCTGTGGG GCCGGGACGT GCTGGATCTG
GCCACGGAAT ACCCCGCTTC CTTCGAATCC GCGGAGGCTT TTGTCGGCAT CCTGAAAAAG
ATCATGCCGC GCCTTTATTC CATCGCCTCC AGCCCGAACG CCCATCCCGA ACAGGTTCAC
CTGTGCGTGG GCGCGGTACG CTATACGGCC CGTGACCGCA AGCGCGGCGG CGTTTGCTCC
ACCTATATGG CGGACCGCCT CCAGCCGGGC CATACGGCCA GGGTATTCGT ACATACCAAC
AAGAATTTCC GCCTTCCGGA AGACGGGGAC ACCCCCATCA TCATGGTGGG CCCCGGCACC
GGCATCGCCC CTTTCCGGGC ATTCTGGGAG GAACGCGCCG CTTCCGGCGC CAAGGGCGGC
AACTGGCTGT TCTTCGGCAA TCCGTACAAG GCCACCGACT TCTGTTATGA AGACGAGCTG
AACCAGTTGA CCGGCACCGG CAAACTGAAG TTGTCCGTGG CCTGGTCCCG AGACCAGGAA
AAGAAGGTGT ATGTGCAGCA CCTCATGGTC CAGGAAGGCG AAGAGCTCTG GAAATGGCTG
GAAGCCGGCG CCTGCTTCTA CGTCTGCGGG GACGCCTCCC GCATGGCGAA GGATGTGGAC
AACGCCCTTC ATGAAGTCAT CCAGACCTGG GGCCATAAAA CTCCGGAGGA AGCCGCGGCA
TATGTGGCGG ACATGAAACA GCACCGCCGT TACCAGCGGG ACGTGTACTA A
|
|---|
| Protein sequence | MTTEPYGKKN PFPAPVLSVR HITGEGSPKE TIHIEYSLDG SGMNYIAGDA LAVIPANDPS
LADALIDKLG LSPDSQVPTP EGETASLKDA LVHCYDITNV NKALLTKWAA ASGSQELDTL
LAGDKDALSD FLWGRDVLDL ATEYPASFES AEAFVGILKK IMPRLYSIAS SPNAHPEQVH
LCVGAVRYTA RDRKRGGVCS TYMADRLQPG HTARVFVHTN KNFRLPEDGD TPIIMVGPGT
GIAPFRAFWE ERAASGAKGG NWLFFGNPYK ATDFCYEDEL NQLTGTGKLK LSVAWSRDQE
KKVYVQHLMV QEGEELWKWL EAGACFYVCG DASRMAKDVD NALHEVIQTW GHKTPEEAAA
YVADMKQHRR YQRDVY
|
|---|
| |