Gene Amuc_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0627 
Symbol 
ID6274195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp735567 
End bp737087 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content55% 
IMG OID642612678 
Producthypothetical protein 
Protein accessionYP_001877245 
Protein GI187735133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.300902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAA TCCTTCCATT ACTATCCCTT CCCCTGCTGT CGCTCGCAGC GGTATTTGCC 
GCTAATACGC CGGAACACAT CGGCAACGAC CTCAAACTGT TCAAAGACTC CTCCTGCACC
TCCCTGAAGC CGGATGTGAA AAACACCTCC GCCTTCCAGT CTGACGCGAT GAAGGAACTC
GCGACCAAAA TCCTGGCAGG CCATTACAAG CCGGACTACC TGTATGCCGA ATACCGGGCC
CTCCCCTCAC CGCGCCAGAC GGGGAAAAAT CTCAGAATCG GCGACGGATT CAGCAAATAC
GACAACATGA CGGGCGTCTA TCTGGAAAAG GGGAGGCATG TCGTCCTGGT CGGCAAGACG
GAGGGGCAGG AAATCAGCCT CCTTCTGCCG AACCTGATGC GCAAGCCGGC CGAAGGAGTG
CAGCCCACAA AAGACCCCAA CGGCTGGGGA TTGCATAAAA AGCAGATTCC GCTCAAGGAA
GGAATCAACA TCATTGACGT GGAAACGCCC GCCAACGCCT ATATCAGCTA TTTCACCGAA
GACGCCGGCA AGGCGCCGAA AATCCCCGTC CATTTCGTAA CCGGCAAAGC CAACGGCTAC
TTTGACACCA CCCGGGGCGA CACCAACAAG GACTGGGTTC GCCTGCTTGA CCAGGCCGTC
TCTCCGATCA TGGATGCCCG GGGAAAATAC ATCCAGGTTG CCTACCCCGT AGAATTCCTG
AAAAAATTCA CCAAAGACCG CGGAACCGAA CTCATCAACG CCTACGACAA GCTCATCGGC
ATCCAATACC AGCTGATGGG CCTGGATAAA TACGGCAAAA TCCCGGAAAA CCGCGTCCTG
GCCCGCGTGA ACTTCAACTA CTACATGTTC CGCGACGGAG ACGGAGTCGC CTACCTCGGA
AACGACGGGA CAATGCGCAT GGTAACCGAC CCTGAAAACG TTCTCAAGGG CGATGCCTGC
TGGGGATTCT CCCACGAAGT CGGACACGTC ATGCAAATGC GCCCGATGAC CTGGGGCGGC
ATGACGGAAG TCAGCAACAA CATCTTTTCC CTGCAGGCCG CAGCCAAAAC AGGCAATGAA
AGCCGCCTGA AGCGCCAGGG CAGCTACGAC AAGGCGCGCA AGGAAATCAT CGAAGGGGAA
ATCGCCTACC TGCAATCTAA GGATGTCTTC AATAAGCTGG TTCCCCTGTG GCAGCTCCAT
CTTTACTTTA CCAAAAACGG ACACCCCGAC TTCTATCCTG ACGTCATGGA GTACCTGCGC
AACAACGCGG GAAACTACGG AGGGAACGAC ACCGTCAAAT ACCAGTTCGA ATTCGTCAAG
GCATGCTGTG ACGTCACAAA AACCGACCTG ACAGACTTCT TTGAGAAATG GGGATTCTTC
AAACCCGGAA AATTCCACAT CGGCGACTAT GCCCAGTACG ACTTTAACGT CACCCCTGAA
ATGGTGGAGG AAACGAAAAA GTGGATTGCC GGCAAAGGCT ACCCGAAACC CGAAACCGAC
ATCACCGAAC TAAGCGAGTA A
 
Protein sequence
MNRILPLLSL PLLSLAAVFA ANTPEHIGND LKLFKDSSCT SLKPDVKNTS AFQSDAMKEL 
ATKILAGHYK PDYLYAEYRA LPSPRQTGKN LRIGDGFSKY DNMTGVYLEK GRHVVLVGKT
EGQEISLLLP NLMRKPAEGV QPTKDPNGWG LHKKQIPLKE GINIIDVETP ANAYISYFTE
DAGKAPKIPV HFVTGKANGY FDTTRGDTNK DWVRLLDQAV SPIMDARGKY IQVAYPVEFL
KKFTKDRGTE LINAYDKLIG IQYQLMGLDK YGKIPENRVL ARVNFNYYMF RDGDGVAYLG
NDGTMRMVTD PENVLKGDAC WGFSHEVGHV MQMRPMTWGG MTEVSNNIFS LQAAAKTGNE
SRLKRQGSYD KARKEIIEGE IAYLQSKDVF NKLVPLWQLH LYFTKNGHPD FYPDVMEYLR
NNAGNYGGND TVKYQFEFVK ACCDVTKTDL TDFFEKWGFF KPGKFHIGDY AQYDFNVTPE
MVEETKKWIA GKGYPKPETD ITELSE