Gene Amuc_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0621 
Symbol 
ID6274723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp729945 
End bp730280 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content57% 
IMG OID642612672 
Productsmall multidrug resistance protein 
Protein accessionYP_001877239 
Protein GI187735127 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.852662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGA TTTATCTGGT GTTGGCCGGT CTCTGCGAGA TCGGATGGCC TCTGGGTTTC 
AAACTTTCTC AAACGCCCGG CACTGGGCCC GGCAAATTCG CCGCCTGTAT CGCCTGCTCC
GTTTTCAGCA TGGTTCTGAG CGGTTTTCTT TTGTGGCTTG CCCAGCGGAA CATCCCCATC
GGCACCGCTT ATGCGGTATG GACCGGCATT GGCGCGTTGG GCACGTTCCT GGTTGGTATT
CTGTGGTTCG GGGATTCTTC CAATATCTGG CGCATGCTGG CGGCATCCTT CCTGCTGATA
GGCATTATCG GGCTGAAGTT GGCCCCCGGG CATTGA
 
Protein sequence
MSWIYLVLAG LCEIGWPLGF KLSQTPGTGP GKFAACIACS VFSMVLSGFL LWLAQRNIPI 
GTAYAVWTGI GALGTFLVGI LWFGDSSNIW RMLAASFLLI GIIGLKLAPG H