Gene Amuc_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0617 
Symbol 
ID6275868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp726218 
End bp726823 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content50% 
IMG OID642612668 
Producthypothetical protein 
Protein accessionYP_001877235 
Protein GI187735123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.349254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGGG AACGCCCCGG CAGAAAGAAC CCATACAAAA CCGGAATGAT AAGCGGAAAA 
CAGCCATTGA ATGCCCCAAC CCGCAAGCGC TCCCAGCGCT CTCCGGAGTG TTGCGCCAGG
GAACACTTTC CGCCCAGGAA GAAGAAAGGA AAGTTTTTAC TGGTGGCAGA AAAAATAATT
CTCTACTATA TTTTTCTGAT TTTTTATTCC ATGAGCCTTC ATTCCGCCCC CTCCATCGTT
TGGGAACTTT CCGGAGAGCC CTGTGAAACG CGGGATCAAG CCCTGTCCGG CATTAAAAAT
AACACGGAAG CTTTCATTAT CTGCAGCCGT GGTGACGAAT TCCTCCAGGC CACCTGCAAT
AGTCCGGAAA ATTACCATTG CGAAATTTCG TTTGCCGGCG GAAAGGACAG GGAGCTTTAC
ATGACGCCCA AAGACCTGGA CTACTCCCGG CTCCATGACC TTTTTTCACG CTATGCGGCA
GGGGAGGATC TTTCCCATCT CAAAAAGGAG TGGACTCTTG ATGCCCACAA ACCCGGCTAT
ATTACCGCCA TCGTTGTCGT TCTGGCAATC ATTGCCGTCC TTGCCGTCAT CATCTTCAGT
TCCTGA
 
Protein sequence
MRRERPGRKN PYKTGMISGK QPLNAPTRKR SQRSPECCAR EHFPPRKKKG KFLLVAEKII 
LYYIFLIFYS MSLHSAPSIV WELSGEPCET RDQALSGIKN NTEAFIICSR GDEFLQATCN
SPENYHCEIS FAGGKDRELY MTPKDLDYSR LHDLFSRYAA GEDLSHLKKE WTLDAHKPGY
ITAIVVVLAI IAVLAVIIFS S