Gene Amuc_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0611 
Symbol 
ID6275863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp718782 
End bp719273 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID642612662 
ProductPhosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_001877229 
Protein GI187735117 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.356177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAA ATGACATCTC ATCCCGGATT GTCTTTGCCG ACCGCGGCAA GGTGAATGTG 
GAAAAAGGCG TGGAATTCGC CCCCAAATTT GACCAGAACG GCCTGATTCC GGCCCTCGCC
ATGGATCATA TTACCCATGA ACCGCTGATG CTGGCCTATA TGAATGCGGA ATCCCTGCGC
ATGACCATGG AACTGGGGGA AGCCGTCTAC TATTCCCGCA GCCGTCAGGA AATCTGGCAT
AAGGGCGCTA CCAGCGGCCA TGTGCAAAAA GTAAAGCAAA TCCTGGTTGA CTGTGACCAG
GATGCCCTGA TTGTGCTGGT GGACCAGTGC GGCGCCGGAG CCTGCCACAC CGGGCACCAC
TCCTGCTTTT ACCGTTCCGT TCCGTTCGGC GATGAACTGA AAGCCCAGCC CCAGGGGGGG
GGCGTCACGC TGCGTGAAGC GGACGGAGGC GTCGTTTTTG ATGCCGAAGC CGTGTACGGC
AAGGGCCATT AA
 
Protein sequence
MEQNDISSRI VFADRGKVNV EKGVEFAPKF DQNGLIPALA MDHITHEPLM LAYMNAESLR 
MTMELGEAVY YSRSRQEIWH KGATSGHVQK VKQILVDCDQ DALIVLVDQC GAGACHTGHH
SCFYRSVPFG DELKAQPQGG GVTLREADGG VVFDAEAVYG KGH