Gene Amuc_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0608 
Symbol 
ID6275837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp716503 
End bp717204 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID642612659 
ProductUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 
Protein accessionYP_001877226 
Protein GI187735114 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAG TGGAATACAG CGTTTATTTT GTTCCGGTGC CGATCGGCAA CCGGGCGGAC 
ATCACCCTGC GGGCGCTGGA CGTGCTGCGC AAGGTGGATG TCATTGCGTG TGAGGACACC
CGCCATTCCG GTCTTCTGCT TTCCCATTAT GAAATCCGCA AACCGCTGGT AAGCATGCAT
GACCACAATG AGCAGCCGCG TGCCGGGGAA ATTGCGGCGC GCGCGGCCGG CGGAGAAAGC
TTTGCCGTGA TCAGTGATGC GGGCATGCCT GGCGTGAGCG ATCCGGGCTA TCGTCTCATT
CAGACCCTCA AGGAAAAGGG AGTAAGCTTC ACCGTCCTTC CCGGGCCATC CGCCGTGGTG
ACGGCATTGG TGGGGTCCGG ACTGCCTACG GACGCATTCT TCTTCGGCGG CTTTCTGCCC
GTCAAATCCG GGAAAAAAAA CGCTGTGCTC CAAACGGCAG TGGAAGCTTC CCATACCAGT
ATTTTTTATG AATCCCCCCA TCGCATCGTC AAAACCGTGC AGGCTCTGGC GGCGTTGGAT
CCGGATATTC CCGTCTGCGT AGCCAGGGAA CTGACAAAAA CCTTTGAAAC TTACCATCGC
GGTCCGGCCT CCCGGCTGGC GGCGGAATTT GCGGAACGCC CCCCCAGGGG GGAAATCGTG
CTGCTGGTGG GCGGCGTCAA TGCCCCGCGG GCTACCCGGT GA
 
Protein sequence
MEKVEYSVYF VPVPIGNRAD ITLRALDVLR KVDVIACEDT RHSGLLLSHY EIRKPLVSMH 
DHNEQPRAGE IAARAAGGES FAVISDAGMP GVSDPGYRLI QTLKEKGVSF TVLPGPSAVV
TALVGSGLPT DAFFFGGFLP VKSGKKNAVL QTAVEASHTS IFYESPHRIV KTVQALAALD
PDIPVCVARE LTKTFETYHR GPASRLAAEF AERPPRGEIV LLVGGVNAPR ATR