Gene Amuc_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0602 
Symbol 
ID6274706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp711903 
End bp713060 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content43% 
IMG OID642612653 
Producthypothetical protein 
Protein accessionYP_001877220 
Protein GI187735108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCG TCTCTACACC GCCGGAAACC TGTCCTGAGG AAAACAACGG ACATTCCCAC 
AACACGCAGA CCTATCCACA TGGAGAAAGC TATGCAGGAG AATGCAAGAA CGGCCTGCGC
CACGGGAAAG GGATCTATTA TTTTAGCGAT GGTTCCTGGG TACAAGGGAC ATGGGAAAAC
GACAAGCTTT CCGGAAATGC CACCTTTTAC CATGCTCAGC ACCAGCGGAC GGATCAGGGA
ACTTTTTGCG GAACAGCCAG AAAAGGCCGT GGAATGATGA CATGGAAAGA CGGCAATATC
TACAAAGGTA CGTGGAACGA TACGGAAGAA GGGTTGCAGG GCAAAGGAAT CATGCTCTCC
CCTGAGGGGA AAAAAGAAGC AGGAAAATGG ATAAACGGCT TATGGAAAAG ACGCTTTTCT
TATAAAAATT CATTTTACGA CATCATCTAT CCCATCCAAA AACATCCTGT TTCTTCCCTG
ATTTCCTTTT TCCTTATCAT TACCCTGCTT ATCCCTGGAA TAACTATTGA CGCAAAGTCG
GAATTTTCAG ATCCGTATAT TATTTTTCTA CTTACAGGCG ATCTATTCCC GTCAGTAAAA
AATGCCGCTT ACGTCAATAT GGCCTGCATC ATATCAGGTT CCGCCCTTCT TATGCTCTCC
GTGTGTAGCC CTGTTTTTAA ACGAATTACT GGAATTCACC ATAATCCTTT AACAGCCATA
TTTTTGTCAT CCATTTTCAT TGGCGGATCC ATGGGATTTC TGCGTACCTC CTACCAAGGA
GAGTTCTTTT ACACCATGAT ATCCATTTTC AGTCTATATT TTCTCATTTT TATGGCGAAA
TGTTATTATC AGTCCGTAAG GTTCGAATTT GCTCTCATTG CAGGTATTCT GTTCTCATGG
CTGTCCATGT TACTTTTCAG GAATTCCTAT TATCTTTTTG AAAATATGTG CTGGCCTTAT
GCTCTTCCGC TGCTATCGGT GCTCGCCTGT TTTGCATGGG GCCGCATTAA ATACGAGCAA
AACGGATTTT TTCCCGCTCA TAAATCATTT ACGCTGGCCA TAGCCGGCAT TTCAATAAAT
TACATTATTC TGCATCCCTG GTTGGACACC AATAAAATCC TGTCTCATTG GAATAGCATT
TTTTCCAGCA TCAACTAA
 
Protein sequence
MLSVSTPPET CPEENNGHSH NTQTYPHGES YAGECKNGLR HGKGIYYFSD GSWVQGTWEN 
DKLSGNATFY HAQHQRTDQG TFCGTARKGR GMMTWKDGNI YKGTWNDTEE GLQGKGIMLS
PEGKKEAGKW INGLWKRRFS YKNSFYDIIY PIQKHPVSSL ISFFLIITLL IPGITIDAKS
EFSDPYIIFL LTGDLFPSVK NAAYVNMACI ISGSALLMLS VCSPVFKRIT GIHHNPLTAI
FLSSIFIGGS MGFLRTSYQG EFFYTMISIF SLYFLIFMAK CYYQSVRFEF ALIAGILFSW
LSMLLFRNSY YLFENMCWPY ALPLLSVLAC FAWGRIKYEQ NGFFPAHKSF TLAIAGISIN
YIILHPWLDT NKILSHWNSI FSSIN