| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0593 |
|---|
| Symbol | |
|---|
| ID | 6275825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 702450 |
|---|
| End bp | 704291 |
|---|
| Gene Length | 1842 bp |
|---|
| Protein Length | 613 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642612644 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_001877211 |
|---|
| Protein GI | 187735099 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3176] Putative hemolysin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGC TCAAGCACCC GAAGATGGTG GACATCAGAG ACATTTTGGA CGAGAATACG
CGTCTGCCTG CTCTGGTGGC CGCGTCCGCC GAAAAGCTGC TGGGCCTGGA ACGCCTGAAC
AAGGCTTATG ACAAGATCGT GCGCGACAAG GAGTCCGGTT CTCAGGAAAA TTTCTTTCAG
CTTGCCTCCA GGCATTTGAA TCTGAAGCTT CAGCTGCGCC CGGGGGACCT GGAAAATATT
CCTAAGAAAG GGCCTGTCGT CGTCGTCGCC AATCATCCGC ACGGCTTGTC GGACGGCATC
ATGTTCGGGG AGCTGCTTAC CCGCGTAAGG GAGGATGTCC GCATCCTGGT CAACGAGCAG
CTTTCCCTGT GCGGGGAGCT GGATCCCTGG CTCATCAAGG TGGACGTGTA TGAGGATGAG
AACGCCCGGC GCAAAAACCT TTCCGGCATG CGCAAGATGA TTTCCTGGCT GCGGCAGGGC
GGGGTTCTGG GCATTTTCCC CGCCGGCACG GTCTCCAGCT TTTCCCTGGC CCACAAAAGG
GTGACGGACG ACCCCTGGAA CGCGAATATC GCCGCCATTA TCCGCATGAC GAAAGCGACG
GTGGTGCCCG TATATTTCCC GGGGCGCAAC AGCCTGCTGT TCCAGGGCAT TTCCCTGATC
AACCGCAAGG CGCGCGTGGC GTTCCTTCCC CGTGAAGTGG GTCGGGACGG CCGCCGGACA
CACCGCATTG TGGTAGGCAA GCCCATTCCG TTCAGCCAGC TTGGACAATA TGATTCCGAT
GAAGCCATCG TCTCCCATCT GCGCCTGCGC ACCTATCTGC TGGGCAAAAG TTATGAAAAA
AGCCGCCGCC CCCATGTGCA CAAAAAGGAC CGGAAGGCGA AGATGGCCGC GCTGACCTCC
CCCGTTTCCG TGCAGGATAT GCAGGCGGAA ATCGACGCGC TGCCCCCGGA GTGTCTGCAT
GCCCGTCAGG AAAATGGAGA TTGGGACGTG TACGTGGCGG ATGCCCTGCA AATCCCCAAT
ATCCTTATTG AAATAGGGCG TTTGCGGGAA TATACTTTCC GCCAGGTGGG GGAAGGTTCC
GGCAACGCCT GCGACCTGGA TACATACGAC AACCATTACA AGCACCTGTT CCTGTGGGAC
AGAACGCACC AGAAAATTGT GGGCGCCTAC CGCATGGGGG AAACGGACAA AATCCTTGCC
CGCTACGGTG TGAAAGGGTT GTACAACGGG GAATACTTTT CCTTTTCCCC TGCCGCTTTG
CGGGTGCTGG ACCGCTCTCT GGAAATGGGG CGCGCCTTCA TTGTTCCGGA ATACCAGAAG
AGGCCGCTGG CTCTCGGTTT CATTTGGGAG GGCATCGGCC AGTTCATGGC CCGCAACCAC
CATTACCGCT ACCTGTTCGG CACAGTCAGC ATTTCCCGGG ATTACACCAA CCTTTCCCGC
GCCCTCATCG TCTCCTATCT GAAGGCGCAT GAAATGGAGC CCGTGCTGGT GAGTGAGGTG
AGGGCCTACA ATCCGCCCCG TAAAGCGGAC CTGAAGAGGT CGGAATCATG CATCCTCCCT
CTGGGGCTGG CAGATGCCCA GGGGCTGTCC CAATTGGTCG CTGATATAGA AGAGGATGGC
AAGGGTATTC CCGTATTGCT CCGCCAATAT CTGAAATTGA ACGGCAAAAT TCTTTCCTTC
AGCGTGGATA AGCATTTTGG CGACGTATTG GACTGCCTGA TCCTGGTGGA CATTTTCAAA
ACGCCGGAGC GTTCCATCAA GCGTTATCTG GGCAAAGACG CGTATGAACA GCTCCTGCCT
TACATGCAGC GGGAGAAAGA GGAGGAAAAG GCGGCGGAAT AA
|
|---|
| Protein sequence | MAQLKHPKMV DIRDILDENT RLPALVAASA EKLLGLERLN KAYDKIVRDK ESGSQENFFQ
LASRHLNLKL QLRPGDLENI PKKGPVVVVA NHPHGLSDGI MFGELLTRVR EDVRILVNEQ
LSLCGELDPW LIKVDVYEDE NARRKNLSGM RKMISWLRQG GVLGIFPAGT VSSFSLAHKR
VTDDPWNANI AAIIRMTKAT VVPVYFPGRN SLLFQGISLI NRKARVAFLP REVGRDGRRT
HRIVVGKPIP FSQLGQYDSD EAIVSHLRLR TYLLGKSYEK SRRPHVHKKD RKAKMAALTS
PVSVQDMQAE IDALPPECLH ARQENGDWDV YVADALQIPN ILIEIGRLRE YTFRQVGEGS
GNACDLDTYD NHYKHLFLWD RTHQKIVGAY RMGETDKILA RYGVKGLYNG EYFSFSPAAL
RVLDRSLEMG RAFIVPEYQK RPLALGFIWE GIGQFMARNH HYRYLFGTVS ISRDYTNLSR
ALIVSYLKAH EMEPVLVSEV RAYNPPRKAD LKRSESCILP LGLADAQGLS QLVADIEEDG
KGIPVLLRQY LKLNGKILSF SVDKHFGDVL DCLILVDIFK TPERSIKRYL GKDAYEQLLP
YMQREKEEEK AAE
|
|---|
| |