Gene Amuc_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0582 
Symbol 
ID6275485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp683210 
End bp683944 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID642612632 
Productprotein of unknown function DUF949 
Protein accessionYP_001877200 
Protein GI187735088 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.380158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA ATGTAGTCTT GTCCTTGCTG GGGCTGGTTC TGCTGGTTTC CGCCGTAGCG 
GTTTTCAATA TGGCATGTGC AGAAAAATCC TCCAACCGTG CGGATATCGC GCGGAAACGG
GTAACGCCCG TGCTGAATTC CTTTCTGGAG CCGTGCGGCG CCAGGGTGGG AAGTCCTGTG
TTTTTACGGG CCGTAAAGGA AGACTCCGTC CTGGAACTGT GGGTGAAACC GGACAAATCG
GAATGCTACA TGCTTGCCAA GCGCTATCCG ATTGCCGCAT GGTCCGGAAA ACTGGGCCCC
AAGGAGAAGG AAGGGGACAG GCAAACACCG GAAGGTTTTT ATGAAGTGGA ACCGTCCGGG
CTTAATCCCC GGAGCAATTA CCATTTGTCT TTCAACATCG GGTATCCGAA TGCCTATGAC
CGTTCCCTGA ACCGGACGGG AAGCTTCATC ATGGTGCATG GACGGGATGT TTCCATCGGC
TGTCTGGCGA TGACCGATTC CGGAATTGAG GAGATTTATA CCATGGTGGA ACAAGCTCTG
GTTCATGGGC AAAAAAACGT TCCCGTGCAG ATTTATCCCT TCGTGCCCAC TCCGGCGCGT
TTGTCAGAGG AAAAGGATTC TCCCCACGCC GCCTTTTGGG CGGACATGGC CCGAGCGTGG
GACTGGACGG AACGGACCCG TACTCCGGCC CGGGTGAAGG CCGTCAATGG CAGGCTGGTC
GTTGTGGAGC AATAA
 
Protein sequence
MKKNVVLSLL GLVLLVSAVA VFNMACAEKS SNRADIARKR VTPVLNSFLE PCGARVGSPV 
FLRAVKEDSV LELWVKPDKS ECYMLAKRYP IAAWSGKLGP KEKEGDRQTP EGFYEVEPSG
LNPRSNYHLS FNIGYPNAYD RSLNRTGSFI MVHGRDVSIG CLAMTDSGIE EIYTMVEQAL
VHGQKNVPVQ IYPFVPTPAR LSEEKDSPHA AFWADMARAW DWTERTRTPA RVKAVNGRLV
VVEQ