Gene Amuc_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0576 
Symbol 
ID6275645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp674410 
End bp678738 
Gene Length4329 bp 
Protein Length1442 aa 
Translation table11 
GC content57% 
IMG OID642612626 
Productpeptidase M16 domain protein 
Protein accessionYP_001877194 
Protein GI187735082 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGG CGGCAGGCAT TCCCAAGCAG GACCCCCAGC TTATCCAGGG GAAGCTCGCC 
AACGGCCTGA CCTACTTCAT CCGCCCGAAC GCGGAACCCA AGGGCCGGTT CAGTATCCGC
CTGCGCGTCA ACACGGGTTC CCTGAATGAA ACGGATGACA TCCAGGGCGT TTCCCACTTT
CTGGAACACA TGGTTTTCAA CGGAAGCACC CATTTCAAGC GCGGGGAAAT GGTTCCCGCC
ATGCAGAAAG AAGGCCTGGG CCTGGGAGGG GACGCAAATG CGTACACCGC CTTTGACGAA
ACCGTGTACA TGATGGACGT GCCCAGCATG AAGGAATCCA CCGTGGACCT GGCTTTCACC
ATCATGCGGG ATTTTGCGGA CGGAGCCCTG CTGGAAGAAA GCGCCATTGA CGCGGAACGC
GGCATCATCA CCAGCGAATA CAAGGTGCGC GACTCCGCCG GTTACCGGGT CATGAAGGAA
GTCTTCTCCA TCATGCTGGA CGGCACCCGC ATTCCCGACC GCTATCCCAT CGGCACGCTG
GAAGTAATCC GCACCGCGCC GCGGGAAAAA TTTATCAATT ATTATCGGAC CCACTACGTT
CCCAGCCAAA TGCAGCTCGT CATCGCCGGG GACATCACAC CGGAACAGGG AAAAGCCTGG
GTGGAAAAGT ATTTTGGCTC CATGAAGAAG GACAACTATT CCTTCCAGAC GGACCGGGGC
ACGCTTAAAA CGGCTACGGA AACCACCGCC CACTGGATTA CCAACAAAGA GGCCACCAGC
ACGGAAGCCA GCATCAACAT CGCCCGGCCC TATGTGAAAA AGCCGGATAC CGTCGCCAAC
CGCAACAAAG ATATCCCCCT GAACGTGGCT TACGCCATGC TGAACCGCCG GCTGGAAAAG
ATGGCGAAGA ATGCGGACTG CCCCTTTATC TCCGCGGAAG GAGGCCGCAT GGACATAGTG
GAAGCGGCGG AAGTGGATTC CATTCAGACC CAGGCGGACT ACAAGAATTG GAAACCGGCT
CTGGCCGCCA TTGAACAGGA ACTGCGCCGG GCCATCGAAT TCGGCTTCAA CAAGGAAGAA
CTGGCGGAGG CCCGCAGCAA CATTACCGCC GCCGCGGAAA ACGCCATCAA GTCCTGGGCC
ACCGCCAAGT CGGAAGACCT GGCTTCCGCC ATCGCCCAGA GCGCCGCACG GGACAAGGTC
TTCACCACGC CGCAGGAAGA CTGGGCCATC TCCAGGGAAG TCGTGGAAAA CCTGACGCCC
GAACAATGCC AGGCAGCCCT GAAGGAAGCC TGGACCGGAG CCTTTCCCCG CGTGATCGTC
ACTTCCAATA AGGAAAACCC CCAGGGAAGC GCCGAAATCA TGAAAGCGTA CCGGGAATCC
CAAACCGCTA AAGTACAGCC CTACCAGGCG GACAGCCGCA AGGATTTTTC CTATAAGTTC
GGAGATCCCG GCAAGGTGAC GGCCCGTACG GAAACCACCG ACCTGGGAGT CACCCAGCTC
ACCCTGTCCA ACGGCATGCG CGTCAACCTG AAGCCCACGG AATTTGACAA GGACTCCATC
AACATCACCT TTGCCGTGGA CGGCGGGGAA CTGAGCAGGC CGGAAAAAGC CTCCGGGCTG
GAACTTTTTG CGAATGCCGT CATGAACGGC GGCGGTTTGA AAGACCACTC CAATGACGAA
CTGGCCGCCA TCATGGCAGG CAAGAAGGTA GGGGTAGGCT TCTCCATGAC GGACCGCTTC
TTCCTGCTTT CCGGAAACAC CAACAGGGAA GACCTGGAAA CGCAACTCCA GCTCCAGACG
GCCTACCTGA TGCACCCCGG TTACCGACAG GACGGCGTTA CCCTGCTCCG GCGGGCCATT
CCCATGATTT ATAACAAGAT GGACCATGAA GTGCAGGGAG CCATGAAGAA GCAGGTTCCT
GCCATCCTTT ACAAGAACAA TCCCCGGTTC ACCTTCCCCA CCCAGGAACA GCTTACCTCC
TACCAGGTCA AGGACGTGCG GGACTGGGTG GATGCCCCGT TGAAAAACAA CTACATGGAA
GTGACCGTTA CGGGAGACTT CAGGACGGAA GACATCATCC CCCTGCTGGA ACGCACCGTA
GGAGCGGTTC CCAAACGTGC GGAAGCTCCG GCAACGCTGG ATGAAACGCT TCGCCATCCG
GCCATGGCGG ACTTCAATTT CTCCAAGGAC CTGACCTATG ACTCCTCCAT TGATAAAACG
ATGGTCTGCC TTTTCTGGAA AACGCCCGGC GGAGAAAATA AAAAGCTGGC CCGCAGGCTG
AACATGCTCA AGGCCGTCTT CTATGACCGC GTATTCAAGG GCCTGCGCGA AGACATGGGG
GAAACCTACT CCCCTTCCAC CGGCCTCAAT ATCAGTGAAA CCTATCCGGA CGACGGCTAT
ATCATCACGA TGAGTTCCGG CGTCATGCGC AATAAGGAGG CCGTGCGCAG CGCCATCGCC
AGAATTGCGG ACGACCTCGG CAAGGGAAAT ATCACCCAGG AGGAACTGGA CCGTGCCCGC
AATCCCATTC TTAACTCCAT GGACCGCGCC CAGCGCGACA ACGGTTACTG GACATCCCTG
CTGAAAGACT CCCAGGCCAA GCCGGAACGG CTGAACCAGC AGAGGGAAAG CATTCCGGAC
GTAAAAGCCA TCACCGTGGA AGAGGTCAAC AAACTTGCCA AAGAGATCTT CGGCAAGGGA
GAGCATCTCA ACCTGAACAT TCTGCCGGAT CACCCGGCTG CGGAAACTCC GCCTGCTGAA
AAGCAGGCGG ACAAAGCCGA CTCTCCCCAG GCCGCCGTCT CCCCGGCGGC TTTTTGCGTT
CGCGCCACCG TCGTGAAGAC TGTAAAAAAA GACTCCGGCA AAAATGGATA TGCCATCATC
ATTTCCGAAG AAACAGCTTC AATGCCGGCC TGGAAGGCCG TGGCGGACAA ACTGGCTGAA
AAACACGGAG GCTCCATCGT CACCGTGAAA GATTCCGTAT TCTCCAAGCT GGACACGCTC
AAAAAAATGG CTCCACGTTT CATGGCCGTC GTCGCACGCC CGGAGGAAAT AGACCGGGTG
CTGGTGAATG ACCTGCACCG CCTGAGCCGC CGGCTGGACG ACGACCCTTA CGGGGACTGT
ATCTGGGGCA TTGTCACGGG GTACACCCCG CAGGCCGCCA TGAGAATAGC CTCTGAAACG
AAGCCTCTCG TCATCAGCCG TGCCATGGGA ACTACCAACG TGGATTCCTC CCGATTCAAA
GACAGCATGA GCATCACGGA CTGGCAGCCC TTCCAATACC TGGAACAGCA TGGCTCCAAG
GGCAAGGTAA CGCCGGCTTT CTACACGAAA GGCCTGAAAG AACAGGACAA GGGGGATGAA
ACCACGCTGG GCGTAACGCC CAAGCTTATG GAATACTGGA AACGTTATTC CCCGCAGCTC
TTCGTAACGG CCTCCCACGC AACCCAGTTT AATCTGGAAA TGCCTTTCGG CAAGGGACTC
ATCGTTTCCG GCAACAACCG GTTCTACGCT CTGGACAAAA AACAATTCAG GGAATTCACC
ACTTTTTTGC ACGGCGTGCT CTTCAACGGA AAGGAAGACG ACCTTCTCTC CTTCCTTAAG
AGAATTAAAG CGCCGGTGAT TGAAACCAGG CCGGTTCCGG CTGTCTGGGT CGCGGCTGGG
AACTGCTTGA TCGGAGATGC CAAGAAGACG AAAAATTCCA TGGCTGTCAC CGCCCTGAGC
CGCTACGGCT TCAACCAGCT GGTAGGCTAC ACCGTCCCTT CCTGGTATGG CAAGGGCGGC
TGGGGGACGC TGGGCCTTCT GTTCAGCAAT CATGACGCCT CCAGCCTGGC GGAAGCCTGG
TATTTGAACA ACCAGTTCAT TCTGGACGAG ACTATGACCC ACTTCCCCAA GCTCATGGAC
GTCTATTTCA ACTCCGCGGA TATCAATGGA ATCAAGGATG ATCCGGACTT TGCCAGGGGC
ATGAACTCCG CCGGATACGG CATGGGCAAG GACCAGCTGG GGCTTATCCA CGATCGGGAT
ACCGTGGCCT TTTACGGAGA CCCCGCCTGG ACGGCGCGCC TGGACGAATC CCGGGCTCCG
TCCCCGTGGC ATATCGACTG GAATGACCCG GCAGATGCCT CCAAAGGGTT CACCGTCACA
GCCAACAAAG ACGCCAAAGG TCGCCTGGGA GTCTGGTTCC CCAATCGGAT CAACGCCGGC
AAGGCCACCG TCACCATTGG CGGAACCGCC ACTCCCATTG AAAAGGCAGG CCTGCTGACC
AACGACTTCC TGCTGCTCCG GGAACTGGAA CTCAAAAAGG GAGAAAAAGC CGTCGTGGAA
ATGGAATAA
 
Protein sequence
MQTAAGIPKQ DPQLIQGKLA NGLTYFIRPN AEPKGRFSIR LRVNTGSLNE TDDIQGVSHF 
LEHMVFNGST HFKRGEMVPA MQKEGLGLGG DANAYTAFDE TVYMMDVPSM KESTVDLAFT
IMRDFADGAL LEESAIDAER GIITSEYKVR DSAGYRVMKE VFSIMLDGTR IPDRYPIGTL
EVIRTAPREK FINYYRTHYV PSQMQLVIAG DITPEQGKAW VEKYFGSMKK DNYSFQTDRG
TLKTATETTA HWITNKEATS TEASINIARP YVKKPDTVAN RNKDIPLNVA YAMLNRRLEK
MAKNADCPFI SAEGGRMDIV EAAEVDSIQT QADYKNWKPA LAAIEQELRR AIEFGFNKEE
LAEARSNITA AAENAIKSWA TAKSEDLASA IAQSAARDKV FTTPQEDWAI SREVVENLTP
EQCQAALKEA WTGAFPRVIV TSNKENPQGS AEIMKAYRES QTAKVQPYQA DSRKDFSYKF
GDPGKVTART ETTDLGVTQL TLSNGMRVNL KPTEFDKDSI NITFAVDGGE LSRPEKASGL
ELFANAVMNG GGLKDHSNDE LAAIMAGKKV GVGFSMTDRF FLLSGNTNRE DLETQLQLQT
AYLMHPGYRQ DGVTLLRRAI PMIYNKMDHE VQGAMKKQVP AILYKNNPRF TFPTQEQLTS
YQVKDVRDWV DAPLKNNYME VTVTGDFRTE DIIPLLERTV GAVPKRAEAP ATLDETLRHP
AMADFNFSKD LTYDSSIDKT MVCLFWKTPG GENKKLARRL NMLKAVFYDR VFKGLREDMG
ETYSPSTGLN ISETYPDDGY IITMSSGVMR NKEAVRSAIA RIADDLGKGN ITQEELDRAR
NPILNSMDRA QRDNGYWTSL LKDSQAKPER LNQQRESIPD VKAITVEEVN KLAKEIFGKG
EHLNLNILPD HPAAETPPAE KQADKADSPQ AAVSPAAFCV RATVVKTVKK DSGKNGYAII
ISEETASMPA WKAVADKLAE KHGGSIVTVK DSVFSKLDTL KKMAPRFMAV VARPEEIDRV
LVNDLHRLSR RLDDDPYGDC IWGIVTGYTP QAAMRIASET KPLVISRAMG TTNVDSSRFK
DSMSITDWQP FQYLEQHGSK GKVTPAFYTK GLKEQDKGDE TTLGVTPKLM EYWKRYSPQL
FVTASHATQF NLEMPFGKGL IVSGNNRFYA LDKKQFREFT TFLHGVLFNG KEDDLLSFLK
RIKAPVIETR PVPAVWVAAG NCLIGDAKKT KNSMAVTALS RYGFNQLVGY TVPSWYGKGG
WGTLGLLFSN HDASSLAEAW YLNNQFILDE TMTHFPKLMD VYFNSADING IKDDPDFARG
MNSAGYGMGK DQLGLIHDRD TVAFYGDPAW TARLDESRAP SPWHIDWNDP ADASKGFTVT
ANKDAKGRLG VWFPNRINAG KATVTIGGTA TPIEKAGLLT NDFLLLRELE LKKGEKAVVE
ME