| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0562 |
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| Symbol | |
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| ID | 6275560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 661692 |
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| End bp | 662456 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642612611 |
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| Product | Triose-phosphate isomerase |
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| Protein accession | YP_001877180 |
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| Protein GI | 187735068 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.525761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCGCA AACCCATCAT TGCCGCCAAC TGGAAGATGA ACATCGGCCC CGCCGAAGGC
ACCCAGTTCA TCGAAAGCTT CAAAAACCTC ATTAAGGGGA AAGACGTCGC GTGTGACGTG
GTCATCATCC CTCCCTTCAC CACCATTCCC TCCGTGCAGA ACGCTCTGGG CGGTTGCTCC
TGCATCGCCG CCGGAGCCCA GAACGTCTCC CAGTACGACA ACGGAGCTTA TACCGGTGAA
ATCTCCACCA GCATGCTGAA TGAACTGAAC CTCAAGTATG TGGTGCTCGG CCACAGCGAA
CGCCGCCAAT ATTTCGGAGA AACGGATGCC ATTATCAACT CCAAAATCAA GAAGGCCATC
GCCGCAGGCA TCACCCCCAT TTTCTGCATC GGAGAAACGA AGGACGAACG CCTGGGGGGC
ATTTTGGAAC CCGTGCTGGA AATCCAGCTC AAGGGCGGCC TCAAGGATCT CACCCCGGAG
GAGGTATCCA ACCTGGTCAT CGCCTATGAA CCCGTCTGGG CCATTGGCAC CGGCCTGACC
GCAACTTCCA AGGAAGCCCA AGAAGCCCAT TCCTTTATCC GCAAGGTTAT TTCCGACGTC
TTCGGAGCAG ACGCCGCCGC CAAGGTGCGC ATCCAGTACG GCGGCTCCGT AAAACCGGAA
AACGTGGAGG AACTCATGGC CCAGCCGGAC ATTGACGGGG CTCTGGTTGG CGGCGCTTCC
CTGAAGCCGG AATCCTTCGC TGCTCTGGTA ACTTCCGCCA AATAA
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| Protein sequence | MSRKPIIAAN WKMNIGPAEG TQFIESFKNL IKGKDVACDV VIIPPFTTIP SVQNALGGCS
CIAAGAQNVS QYDNGAYTGE ISTSMLNELN LKYVVLGHSE RRQYFGETDA IINSKIKKAI
AAGITPIFCI GETKDERLGG ILEPVLEIQL KGGLKDLTPE EVSNLVIAYE PVWAIGTGLT
ATSKEAQEAH SFIRKVISDV FGADAAAKVR IQYGGSVKPE NVEELMAQPD IDGALVGGAS
LKPESFAALV TSAK
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