| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0551 |
|---|
| Symbol | |
|---|
| ID | 6275295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 651511 |
|---|
| End bp | 652485 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642612601 |
|---|
| Product | phage SPO1 DNA polymerase-related protein |
|---|
| Protein accession | YP_001877170 |
|---|
| Protein GI | 187735058 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.0957804 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCG GCCTTCCCCA ACACCTCACG CTGGATTATC TGCGCGCCCT GCTATCCCGG
GGCGTGGAGA AAACCACCGT CACGGAGGAA GCCAGAATGG TCCTGAGAAA ATGGGTCATG
GACGCGCGCC GGATATCCGG AAGCCCCCTC CCCGCTTCCG TTTACGCCAA GCCTGCCGCA
AATGAAACAC GGCCGAAACA GCCCACCCCG GAGCAGACGC CTCCAGATTC CGTGGATGAA
GCATCCTTCG GCAATGAACT CCGGGATATC CTCAACGGAG TACAGCCGCA CAGAACGGAG
GAGGATGCTC CGGTACCCCG CCATATTTCC TTTGATCTGG AAGGTGAAAC GGAGGAAGAA
AAACTGTCCT CCCTGCGGGA GCTGGTCGTT AACTGGCCGC CGCTCCGGAA CATGGATTCC
TTGAGGGAAA CGCCCGTGTT TTCCTCCGGC AATCCCAGGG CGGACATCAT GATGGTAACG
GACGCCCCCG GCCTGTATGA AGAAAAACAG GGGGTTCCCC TGGCCGGGCC TTCCGGACAA
AAGCTGGACG CCATGCTGAA AGCCATGGGG CTTTCCCGTT CCGATATTTA TCTGACCCAT
CTGGTCAAAT ACCGTCCGGC CCTCCCCCGG CAGCTTACCA ATAACCGCCC GCCTACAGAC
CGGGAGATAG AAATTTCCCT GCCCATTCTC CGGGAGGAAA TTATGCTGGT GCGCCCGAAA
GTAGTGGTGG CCCTGGGAGC AATCTCCGCC CGCGGCATCC TCCAGTCAGG AGAGACGCCT
CTTTCCGCCC TGAGAGGCAC CTTCCACACA GCTTTCAACA CGCCCGTGCG CGTTACTTAC
AATCCCAGTT ATCTTCTCCG CACGGAAGAT ATTTCAGAAA AGCGAAAGGT TTGGGAGGAT
ATGCTGTGTG TCATGGAACA GGCAGGCCTG CCCATCTCCG AAAAACAACG TTCCTATTTC
CTGCCCAAAA AGTAA
|
|---|
| Protein sequence | MSAGLPQHLT LDYLRALLSR GVEKTTVTEE ARMVLRKWVM DARRISGSPL PASVYAKPAA
NETRPKQPTP EQTPPDSVDE ASFGNELRDI LNGVQPHRTE EDAPVPRHIS FDLEGETEEE
KLSSLRELVV NWPPLRNMDS LRETPVFSSG NPRADIMMVT DAPGLYEEKQ GVPLAGPSGQ
KLDAMLKAMG LSRSDIYLTH LVKYRPALPR QLTNNRPPTD REIEISLPIL REEIMLVRPK
VVVALGAISA RGILQSGETP LSALRGTFHT AFNTPVRVTY NPSYLLRTED ISEKRKVWED
MLCVMEQAGL PISEKQRSYF LPKK
|
|---|
| |