| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0550 |
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| Symbol | |
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| ID | 6275278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 649937 |
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| End bp | 650608 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612600 |
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| Product | 3D domain protein |
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| Protein accession | YP_001877169 |
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| Protein GI | 187735057 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3584] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.0838102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTTAA GAATAATTGC CACCCTGTCT TGTGCCGTCG CGGCCATGTT TGTCAGCAGC
TGTTCGACAA ACGGCGCTGT AACCGGCATG GGGAAATCCA GTAGTGACGC TCTTGTTTTG
GCCCGTGTAG GTGAAACTGC CCAGGGATTC GTCCAGCCCC TGGCACCCAG TCGTTCGGCA
GCGCCTTCTT CCAAACTTCC CAAGTTGGGG CGCGACAAGC ACAAGATGCC GTTTTATCAT
CCCGCCCAGC GCACCCGCGT AGTGCGCACC ACGGCTTATA CCCATTCCGA ACGAGACCAT
TTGGCCTATG GCCCCCGGAA TGCCGTCGGT ACGGCGCTGA AATACACGTC TTCCGTCCGC
AGCGCCGCTG CAGACTGGTC CGTTTATCCC TTGGGGACTA CTTTCCGCAT CAAGGGCCAG
CCCTACCTTT ACGTTGTTGA TGATTACGGA AGCGCCCTGG TCGGAACCGG AACCATTGAT
ATTTACCAGC CCAACAAAAA GCTGATGAAG GAATGGGGCC GCCGTTATGT GGAACTGACT
ATCGTCCGCT GGGGAGATCC CGCCAACAGT CTGGAGGTGC TCGGTAGCCG TCGCGGCTAC
AGGCACTGCC GCGCCATGTA TGCGGCCCTG CAGCACCGCG TTTCCAAGGG GTTTTACGCC
AAGGCCGACT GA
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| Protein sequence | MNLRIIATLS CAVAAMFVSS CSTNGAVTGM GKSSSDALVL ARVGETAQGF VQPLAPSRSA
APSSKLPKLG RDKHKMPFYH PAQRTRVVRT TAYTHSERDH LAYGPRNAVG TALKYTSSVR
SAAADWSVYP LGTTFRIKGQ PYLYVVDDYG SALVGTGTID IYQPNKKLMK EWGRRYVELT
IVRWGDPANS LEVLGSRRGY RHCRAMYAAL QHRVSKGFYA KAD
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