Gene Amuc_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0538 
Symbol 
ID6275092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp633838 
End bp634311 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content58% 
IMG OID642612588 
Producthypothetical protein 
Protein accessionYP_001877157 
Protein GI187735045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.325022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.281647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTAA AGGAAAAAAT CGTCCGTTTC TGTTTGCTCC TGCTCCGGCT GGGGATGGGG 
GGCTTCTTCC TTTTTGTCGC GGCGCGCAAG CTGCTTCATC TGGACCAGCT TCAGGAGACG
ATCGACCGTT TCGCCATTTT CCCGGAGGCC TGGGGGCATC CTCTGGCCTG CCTGGGAGTG
TCGTGCGAGA TTGCGGTTGG CCTGGGGCTT CTGTTCCGCA GAACCTGCGC CGGGGCCGCG
CTGCTGGGCA GTGCGCTTAC GTTCACGTTC GTGGCGTTGT TCGTCCAGGG CTGGGCCAGG
GGGCTTTCCC TTTCCTGCAA CTGCATCGGT GTGGAGAGGG TGGTAACCAG CTATCCCTTT
GAAGTGGCTT GGAGACTGGT CCTCTTTTTC CTCATGCTGA TTCTCCTGTG GGATTCCTGC
CGGAAGGGAA AAACGTACTT TAATGTGACC CGGCTGGATT TCAGTGAAAT GTGA
 
Protein sequence
MMLKEKIVRF CLLLLRLGMG GFFLFVAARK LLHLDQLQET IDRFAIFPEA WGHPLACLGV 
SCEIAVGLGL LFRRTCAGAA LLGSALTFTF VALFVQGWAR GLSLSCNCIG VERVVTSYPF
EVAWRLVLFF LMLILLWDSC RKGKTYFNVT RLDFSEM