Gene Amuc_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0535 
Symbol 
ID6275004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp630811 
End bp631518 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content61% 
IMG OID642612585 
ProductPhosphoribosylformylglycinamidine synthase 
Protein accessionYP_001877154 
Protein GI187735042 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 
TIGRFAM ID[TIGR01737] phosphoribosylformylglycinamidine synthase I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.814642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCACG CACTTTTACT GAAATACCCC GGCACCAACT GCGATGTGGA AACGGAACGC 
GCCCTGCGCG CGGCAGGGTT CTCCACCCAG ATCCAGCCCA TCGCCACGGC TACGCCGGAA
CACGTCGCAA AATCCCAGCT TGTCGTCCTG GGCGGCGGCT TCAGCTACGG AGACTACGTC
ACCAGCGGCC GCCTGGCCCA GTTGGAAACG GAACGCTTCC TGGGAGATGC CCTGCAGCGG
CACCATGCCG GAGGAGGCAT GCTCCTGGGC ATCTGCAACG GGTTCCAGAT TCTCACCAAG
CTGGGCATTC TTCCCGACTC CAGCCTGATT GACAACAAAA AGGAACGCTT TGAATGCGTC
TGGGCTAAAC TGGTGAAAGT AGCCAGGAAC TCTCCCTTCC TTCAAGGCCT GCCGGATGAA
TTCGAACTGC CCTCCGCCCA TGCGGAAGGG CGCCTGGTCA CCCGTCCCGG AGATGCGGAA
AAATACCTGG CTTCCGGGAA TGTGGCTCTC CAGTACGTAG ACAACCGCGA CGGCTGCGAA
TGCAGTATCG CCGGCCTCCA GGATTCCACC GGGCGCGCCA TGGGTCTGAT GCCCCATCCG
GAACGCTTTC TGCTGCCCCG CCACCACTAT GACAAGGACT GGGCCGGCAA CGAAGACTGG
GGCTGGGGGT ACTTCCTCTT CAAATCCGCC TTTGACGCCC TGAAATAA
 
Protein sequence
MPHALLLKYP GTNCDVETER ALRAAGFSTQ IQPIATATPE HVAKSQLVVL GGGFSYGDYV 
TSGRLAQLET ERFLGDALQR HHAGGGMLLG ICNGFQILTK LGILPDSSLI DNKKERFECV
WAKLVKVARN SPFLQGLPDE FELPSAHAEG RLVTRPGDAE KYLASGNVAL QYVDNRDGCE
CSIAGLQDST GRAMGLMPHP ERFLLPRHHY DKDWAGNEDW GWGYFLFKSA FDALK