Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0532 |
Symbol | |
ID | 6274982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 627107 |
End bp | 627817 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642612582 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_001877151 |
Protein GI | 187735039 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCTA TTTACGAAGG GAAGGCCAAA CGCCTTTATA CGACTGACAA TCCCAACGTC CTCCGCATGG AATACAAGGA CGACGCCACT GCCGGAAACG GAGCCAAGAA GGCCCAGTTT GAAAACAAGG GCAGGATGAA TAAGGCCATC ACCCTGGTCA TCTACCGCAT GCTGGAAAGC AAGGGCGTGA AAACCCACCT GGTTGCGGAC GTGGACGACA TCAACATTGA CGTAAAAAAG GTTTCCATCC TTCCTCTGGA AGTGATCGTG CGCAACATCG CCGCCGGCTC CTTCAGCCGC CGCATGGGCG TCAAGGAAGG CACCCCCTTC AAGAAGCCGA TCGTGGAATT TTCCTACAAG GACGACAGCC TGGGCGACCC CTTCATTAAT GATGACTACG CCCGGGAAAT GAACGCCGCT ACGGAAGAGG AATGCGTCTT CCTGAAGAAT CAGGCCCGCA TCGTGAATGA CGTGCTGATT GACTTTTTCA AACAGGTCGG CCTTACGCTG GTGGACTTCA AAATCGAGTT CGGCCGCTTG GCGGAAGATC CCTCCCAAAT CGTGCTGGCA GATGAAATTT CCCCGGATAC CTGCCGCCTG TGGGACATCA AAACCGGCGA GAAGATGGAC AAGGACCGCT TCCGCCAGGA CCTCGGCAAC GTGATGGAAG CCTACGAAGA AGTCCTTTCC CGGCTCCAGA ACAAGGCTTG A
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Protein sequence | MEPIYEGKAK RLYTTDNPNV LRMEYKDDAT AGNGAKKAQF ENKGRMNKAI TLVIYRMLES KGVKTHLVAD VDDINIDVKK VSILPLEVIV RNIAAGSFSR RMGVKEGTPF KKPIVEFSYK DDSLGDPFIN DDYAREMNAA TEEECVFLKN QARIVNDVLI DFFKQVGLTL VDFKIEFGRL AEDPSQIVLA DEISPDTCRL WDIKTGEKMD KDRFRQDLGN VMEAYEEVLS RLQNKA
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