Gene Amuc_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0526 
Symbol 
ID6274894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp618416 
End bp618880 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content57% 
IMG OID642612576 
ProductDoxX family protein 
Protein accessionYP_001877145 
Protein GI187735033 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA TTGATTCCAT TACCATTATT GCAGCGGCAT GGGGCCTGCT GGTTCTCCGG 
CTGACGCTGG CTTTTATCCT GTGGCCACAC GGGACCCAGA AAGTGCTGGG CTGGTTCGGG
GGCGCGGGCT GGGAGGGCAC CTACCGGGCC TTCACGGAAA AAATGGGCAT TCCCCCCTTT
CTGGCCAAGG TGGCCATGCT GACGGAATTT TTCGCCCCTA TCTGCCTGAT ACTGGGCGTA
TTCACCAGAA TAGCGGCTCT CAGCGTTATC ATCCTCATGG CCGTAGCCAT AACCAAACAC
GTCAAAAACG GCTACTTTTC CAACTGGTCC GGCAAAAAAG CCGGGGAAGG CGTAGAATTC
CACCTGCTTT ATGCGGGCTC CGCTTTCGCC CTGTTCCTGA CAGGCCCCGG CCCTTGGTCC
GTGGACGCCT GGTGCATGAA CATCGTGCAT GTCATCTTCG GTTGA
 
Protein sequence
MDTIDSITII AAAWGLLVLR LTLAFILWPH GTQKVLGWFG GAGWEGTYRA FTEKMGIPPF 
LAKVAMLTEF FAPICLILGV FTRIAALSVI ILMAVAITKH VKNGYFSNWS GKKAGEGVEF
HLLYAGSAFA LFLTGPGPWS VDAWCMNIVH VIFG