| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0507 |
|---|
| Symbol | |
|---|
| ID | 6275542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 596749 |
|---|
| End bp | 597621 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642612557 |
|---|
| Product | ATP synthase F1, gamma subunit |
|---|
| Protein accession | YP_001877126 |
|---|
| Protein GI | 187735014 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
|---|
| TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAATC TGAGAGACAT CAGACGCCGG ATCAAGTCCG TCAAAAACAC GTCCCAGATC
ACCAGGGCGA TGCAGATGGT GGCTTCCGCC AAAATGCGCC GCGCTCAGGA CCAGGCCGTC
AAGGGACGCC CCTATATCCG CGCCCTGGCG GAAGTGCTCT ACCATCTCCA GGATGAAATT
GACACCAGCA ACAGCCCTCT GATGCAAACC CACGGCGGCG CGGATCTGGT GCTGCTGGTG
AATACGGATC GCGGCCTTTG CGGCGGGCTG AACGCCAACC TGATCAAAAT GGTCCGGGAA
CAGGCCCCGG AAAACGCCCA TTACATCACC ATCGGCCGCA AGCTGAATGC TGCGCTCGCC
AAATTGAATG AACGGTTGGA GGCCACCTGG AGCCTGACGG ATCCCCTGTC CCTGCTGGAA
CTAAAGCCGG TATTTGATTT CATCGTGCAA AAGTTCAAGG CGGAGGAATA TGGGCGCGTT
TTCGTGGCTT TCTCCGGTTT TGTGAACACA ATGGTCCAGA AGCCTGTCTT TCGCCAGCTT
CTTCCCATTG AGCCGGAACC CCTGATGAAC ATGGCGAAAG CCGGAGGCTC TTCCCTGGAC
GGAGCAGATG CCCATAAGCA ATTCCTGCTG GAACCCAGCC CCGCTGCTCT GCTGGATACC
ATCCTGCCTC TTTACGTTTT CCACGGACTG GTTCAGATTG TGCTGGAGGC CCGGGCATCC
GAACACTCCG CCCGCATGGT CGCCATGAAG GGAGCCACGG AAAACGCCAA AAACATCATC
GGCGGCCTCA CCCTGGACTA CAACAAGGCG CGCCAGACGC AAATCACCAA CGAACTTCTG
GAAATTACCA CGGCTATGCG CGCTATGGAA TAA
|
|---|
| Protein sequence | MGNLRDIRRR IKSVKNTSQI TRAMQMVASA KMRRAQDQAV KGRPYIRALA EVLYHLQDEI
DTSNSPLMQT HGGADLVLLV NTDRGLCGGL NANLIKMVRE QAPENAHYIT IGRKLNAALA
KLNERLEATW SLTDPLSLLE LKPVFDFIVQ KFKAEEYGRV FVAFSGFVNT MVQKPVFRQL
LPIEPEPLMN MAKAGGSSLD GADAHKQFLL EPSPAALLDT ILPLYVFHGL VQIVLEARAS
EHSARMVAMK GATENAKNII GGLTLDYNKA RQTQITNELL EITTAMRAME
|
|---|
| |