| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0501 |
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| Symbol | |
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| ID | 6275397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 591093 |
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| End bp | 592232 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612551 |
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| Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
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| Protein accession | YP_001877120 |
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| Protein GI | 187735008 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.32466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATTC CTTTCAACCA ACCTCACCAG CACGGTCCCG AATTGGATTA TATCCGGGAC
GCCATCCAGC GCGCCCATTT ATGCGGAGAC GGCTATTACA CGAAAAAATG CCATGAACTG
CTTGCGGAAC GCACCGGCGC CGGAAAGGTT CTGCTGGTTC ATTCCGGAAC CGCCGCGCTG
GAGATGGCGG CCCTGTTGAT CGACTGCCGC CCGGGCGACG AGATTATCAT GCCTTCCTAT
ACGTTCGTCT CCACGGCGAA CGCGTTTGTG CTGCGCGGCG GCGTTCCTGT ATTCGTGGAT
ATCAGGCCGG ATACGCAGAA TATTGACGAG ACGCTGATAG AAGCGGCCAT CACGGACCGC
ACCCGCGCCA TTTGCGTGGT TCATTACGCG GGCGTGGCTT GTGAAATGGA TGCAATCATG
GAAATTGCCG AGAGGCATCG CCTGTATGTG ATTGAAGACG CTGCCCAGGG CGTCGGCTCC
TGCTACAGAG GGCGTCGGCT CGGCTCCATC GGCCATTTGG GCTGTTACAG TTTCCACGAG
ACCAAGAATG TCATTTCCGG AGAGGGAGGA GCCCTGCTGG TGAATGACCC CTCCCTGATG
GAACGCGCGG AGATTATCCG GGAAAAAGGG ACCAACCGTG CCAGGTTTTT CCGCGGGCAG
GTGGACAAAT ACACCTGGGT GGACGTAGGT TCCTCCTATC TGCCCGGAGA GATGATCGCC
GCTTATTTGT ATGCCCAGCT GGAACACGGG CAGGAGATCA ACGGGGAAAG GCTGAAGTGG
TGGGATATGT ACCACCGCGC GCTGGCTCCA TTGGAAGAAC AGGGGGTGTT GCGGCGTCCG
TGCATTCCGG AGCATTGCAC GCATAACGCC CACATGTATT ACGTGTTGCT CCGTTCCATG
GAGGAGCGCA CGCGCTTGAT CAACAAGCTG GCGGAGCACG GGATTAAAGC GGTGTTCCAC
TACATTCCCC TCCATTCCTC CCCTGCCGGG ATGAGATTCG GGCGTTCTGC CGGGGCCATG
CCTCATACGG ACCGTACCAG CGATACGTTG CTGAGGCTTC CTTTGTATTA CGATTTGGGG
GAAGAAGGTT GCCGGGAGGT GTTGCGGGCC GGCTTCGGGC TGGAGGGAGT TGAATCATGA
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| Protein sequence | MEIPFNQPHQ HGPELDYIRD AIQRAHLCGD GYYTKKCHEL LAERTGAGKV LLVHSGTAAL
EMAALLIDCR PGDEIIMPSY TFVSTANAFV LRGGVPVFVD IRPDTQNIDE TLIEAAITDR
TRAICVVHYA GVACEMDAIM EIAERHRLYV IEDAAQGVGS CYRGRRLGSI GHLGCYSFHE
TKNVISGEGG ALLVNDPSLM ERAEIIREKG TNRARFFRGQ VDKYTWVDVG SSYLPGEMIA
AYLYAQLEHG QEINGERLKW WDMYHRALAP LEEQGVLRRP CIPEHCTHNA HMYYVLLRSM
EERTRLINKL AEHGIKAVFH YIPLHSSPAG MRFGRSAGAM PHTDRTSDTL LRLPLYYDLG
EEGCREVLRA GFGLEGVES
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