| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0494 |
|---|
| Symbol | |
|---|
| ID | 6274730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 585230 |
|---|
| End bp | 585805 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642612544 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001877113 |
|---|
| Protein GI | 187735001 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4430] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.164199 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCAG TCAATTTGTT GAAAGCTAAA AATCGTGATG AGTTAAGGCA ATGGCTTGAA
CAGAATCATA AGACTGAAAA AGAATGCTGG GTTGTTGTAA AACGTGGTAA ACCAAAAGGG
AATAACACAT TTTGGTATAT TGACGCAGTA GAAGAAGCTA TGTGTTTCGG CTGGATTGAT
AGTACAACAA AAAAACTCGA TAATGGTATC ACTGCACAAA AACTGGCTCC CCGCAGAACA
GTTAGCTTAT GGTCTGAACT AAATAAGGAA CGCTGCCGCA GGATGGAAAA ATTAGGAAAA
ATGACGGAAG CCGGACGTTC TGCTTTACCC GATATGTCAT CAGCAGGTTT TATCATAGAT
AAAGAAATTC TAAAAGCATT ACAAACTGAT AACGAAGTGT GGGAAAATTT TCTTAAATTT
CCACCTCTTT ATCAGAGGGT ACGCATAGAT ACTATACAGA TAAAAAAGAA ACAACCACAA
CTTTTTCAAA GAAGATTACA AAAGTTGCTT GAGAATACAA AAAAAGGAAT AATGTACGGC
GAATGGAATG ATAATGGGCG ATTATTAGAC TATTAG
|
|---|
| Protein sequence | MEPVNLLKAK NRDELRQWLE QNHKTEKECW VVVKRGKPKG NNTFWYIDAV EEAMCFGWID
STTKKLDNGI TAQKLAPRRT VSLWSELNKE RCRRMEKLGK MTEAGRSALP DMSSAGFIID
KEILKALQTD NEVWENFLKF PPLYQRVRID TIQIKKKQPQ LFQRRLQKLL ENTKKGIMYG
EWNDNGRLLD Y
|
|---|
| |