Gene Amuc_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0490 
Symbol 
ID6275414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp577803 
End bp580061 
Gene Length2259 bp 
Protein Length752 aa 
Translation table11 
GC content47% 
IMG OID642612540 
Producthypothetical protein 
Protein accessionYP_001877109 
Protein GI187734997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.274799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGTA AAAAAAATAG AAAAATTCCC TTGTGGTGGG GGATAATAAT TTGGGCAGTA 
CTTGTACTGC TTTTTTTTGC TCCTGCCGTG TTTGGAGGAA AGGTTTTAGC CCCGGTGGAT
TGTGTGGAAT GCCTGTTCAA ACCATTCGCA ACTCAGCCAA TGGAGGAAGT CCATAACCAA
TATAACGTAG ATGGGGCTTC TCAATATTTA CCTTATAGCT GGGCGATGCA GCAGTCCTGG
CAAAGTGATG GGTATATGGG ATGGAACCCT TATACTCACA ATGGGACTTC ACTGCCGGAA
AATACCATGT TAAGCCCGGG GGATTGGCAT CATTGGTTAT TTGGTTTTCT TCCTTTCTGG
ACGGCATGGG ATGCGGGAAT CTTGCTGCAG TTTTTTATCG CAGGGCTGGG GATGATCATT
CTACTGAAAT CCAGGGGAAT TCCTATTCCG TACGTATTGC TGGGAGCTGT GAGTTTCAGT
TTTTATTCCC AGTTTATTAT GTGGATATAT GACCGGTGGC TTGGTGGAAT AATCTGGGCG
CCGTTGATTG TCTGGTCCCT GTTGGAAGGG AGAAGGAAAA ACAAATGGGT GCATCTTCCC
TCTATTCTCT TTATTGTTCT CGGATTCAGA GGAGGCCATT TGCAAGCGTG TCTCTTTGTT
TTTCTTTTGG TGCTGTGCGT GTTTCTTGCG GATTGGTGGA AACGGGCAGA CCGCTGGTCC
TGGAAAGTTT TTCTGAAATC ATCATCTTTT TATTTGATCT CCGGATTTTT GGCGGCGTTG
CTTTCCTTGG ATGTTTTTGT GGACACCCTG CCGCGCATGG AAGGCTGTAA AAGCTTGCCG
TTTGTCTGGG GGCTGGAAAA TATTCCTTTT CTGGCCACAT CTGTGATGCC GACGCTCTTC
GGCATTCCTC AGACAATCAG TATTTCCAAA GTGATTGGCG CTGATTTATT CGATATCAAA
TTTGGTGGAG GAGTTGTTTT TGTGCTGGCT GTTCTGGCAT TGTTTAACCG CCGGGCACCG
TTGACCGCCA AGTTTTGTTT TCTTGTCAGT TTAATTGTTT CATGCACACC TCTTTCCACT
TTCCTCTATT CACGTTCCAC GGTTGTGATG GCTTTTGGAA TGAGCTGGCT TGCCGGATGG
CAGTTATTTG ACCTTAGGCG GCATCCGGTT CTTCCTATCT GGCGCAGACT TGCATGGTGG
GGAATTGGAA TTTTGTGTAT ATGGCTTGCC GTATCGGTGG CAGTTCAGTG TTTCCATGAA
CCATTGCTGT TAAAATTGCA TAGCTTTATT GACGGAAACA TAACGACTTC TCAGCAAAAA
TACCGTCATT CCTGGTATTT GCTCAGAAGC GAGCGTCTCC TGGACCAGCT GATGATTTGG
GATTGGCGCA ATGCCTTATT GATTTTACTG GTCAGCGTAG GGGGCTGGGC CTGTTCCCGC
CTGAATATAT CCAGCCGTTA TCCGAAGTGG TGGGCAGGAC TTGTGGTATT ATGTACCTTT
GGGGAACAAA TAGTGTTTTC TTCTTCATGG ATTGCCTATT CCGACAAACC GGAAAGCGGC
TATCTTTATA AAGAACCGGA ATGGATGTCC GAGTTTCGCG GACATGTGGG GGATGGTGCC
GTTGTTATCG TCAATCCTCA TAATGACTTG GATTTTTTAT GTACTAATCA TTTATCCACA
TATGGAATAA GGCTGGCCTC AGGTTATGAA ACGGTGCAGC CCAGATATCT GAGACCTTTG
TCGGATGGAC ATTATTATCC GAAAGATTAT GCCATGGCCG GCATTTCTCA TTTGTTGTGT
GATGCCAAAG CCGGAAGGCC GTCTTTTGAC GGGTGGAATC TGGTTCAGGA AACGGAAGAT
TTCTTCTTGC TGGAAAATCC CTTGTACCGT GGACGCTATT TTGTCCGAAC CCAGGGGGAA
GAGAATCATT TTTCTCCTGT TGTTCCGGAT TGGAGAACGA ATAATAAGAT CCATGTCACC
GTGCCGCCAG GAACAAAGGA ATTGTCTGTT CTTGAGAGCT ATTCCAGGGG ATGGAGCGCC
CGCACCGGGA AGGGGGAAGA GCTTCCTTTA TCCAGTACTG AGCGCTATTC TATTCTTGTT
TCTGTTCCGG ATTCGGAACA GCAGACGGAA ATCCTCCTGC AGTACCATAC GCCTTACCGT
GAATGGTATT ACAGCATGAT GGGGGGAACT GCTCTGTTTC TGCTTGTGGC GGCTCTCTTG
CAGCGGCGCG TTAATATCAG GACGGAAAAG GAGGGATAG
 
Protein sequence
MNCKKNRKIP LWWGIIIWAV LVLLFFAPAV FGGKVLAPVD CVECLFKPFA TQPMEEVHNQ 
YNVDGASQYL PYSWAMQQSW QSDGYMGWNP YTHNGTSLPE NTMLSPGDWH HWLFGFLPFW
TAWDAGILLQ FFIAGLGMII LLKSRGIPIP YVLLGAVSFS FYSQFIMWIY DRWLGGIIWA
PLIVWSLLEG RRKNKWVHLP SILFIVLGFR GGHLQACLFV FLLVLCVFLA DWWKRADRWS
WKVFLKSSSF YLISGFLAAL LSLDVFVDTL PRMEGCKSLP FVWGLENIPF LATSVMPTLF
GIPQTISISK VIGADLFDIK FGGGVVFVLA VLALFNRRAP LTAKFCFLVS LIVSCTPLST
FLYSRSTVVM AFGMSWLAGW QLFDLRRHPV LPIWRRLAWW GIGILCIWLA VSVAVQCFHE
PLLLKLHSFI DGNITTSQQK YRHSWYLLRS ERLLDQLMIW DWRNALLILL VSVGGWACSR
LNISSRYPKW WAGLVVLCTF GEQIVFSSSW IAYSDKPESG YLYKEPEWMS EFRGHVGDGA
VVIVNPHNDL DFLCTNHLST YGIRLASGYE TVQPRYLRPL SDGHYYPKDY AMAGISHLLC
DAKAGRPSFD GWNLVQETED FFLLENPLYR GRYFVRTQGE ENHFSPVVPD WRTNNKIHVT
VPPGTKELSV LESYSRGWSA RTGKGEELPL SSTERYSILV SVPDSEQQTE ILLQYHTPYR
EWYYSMMGGT ALFLLVAALL QRRVNIRTEK EG