Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0488 |
Symbol | |
ID | 6275419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 575060 |
End bp | 576496 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642612538 |
Product | FeS assembly protein SufB |
Protein accession | YP_001877107 |
Protein GI | 187734995 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01980] FeS assembly protein SufB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.8001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.461804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA CACCTGACAT GTCAGAGAAC GGGAACACAC AGAACCTGTT TGACTTCGAC CGGAGCAAGG GAAACTTCTC CTTCCCGGAA CGCCATAAAT TTGATGCCGG ATACGGCCTG ACGGAGGCCA CTATTGACTA CATCTGCGAC GTCAAGGACG ACCCGGAATG GGTGCGCCAG TTCCGCAAAA ACGCGCTTGC CGTTTTTGAA AGCAAGCCCA TGCCCACCCA CTGGGCTTCT CCGGATATTA AAAAAATAGA CTTCTCCCAA ATCCGCTACT ACCTCTCCGA CGGAGAACGG CCCAAACGAA GCTGGGACGA CGTGCCGGAG GATGTAAAGC GCACCTTCGA ACGCCTGGGC GTTCCGGAAC AGGAACGCCA GTTTCTGGCG GGCGTGGAAG CCCAGTACGA CTCCGAATCC GCCTACTCCA ACATGAAGGA GGAACTCCGC AGCCAGGGCG TCATCTTCGT CAACTCCACG GAAGGCCTGA AACACCATGA AGATGTCTTC CGCCCCTGGT TTGGAAAAGT CATTCCCACG GGAGACAACA AATTTTCCGC TCTGAACAGC GCAGTATTTT CCGGAGGTTC CTTCATTTAC GTACCCAAAG GGGTTAAACT CAAACATCCT CTCCAGGCGT ATTTCCGAAT CAACTCGGAA AATTTCGGGC AGTTCGAACG AACTCTCATC ATTGCGGATG AAGGTGCGGA ACTCATGTAC ATGGAAGGAT GCACGGCACC CCAGTTTGAA ACTTCCACCC TCCACTCCGC CGTTGTGGAA CTGGTCGCGC TCAAGGGCGC GAAAATTCAG TACGTCACCG TGCAAAACTG GTCCTCCAAT GTCTTCAACA TGGTCACCAA GCGCGGTCTT GCCATGGAAG ATGCGGAAAT CCGCTGGATA GACTGCAACA TTGGTTCCGG CCTCACCATG AAATACCCGG CTGTGGTGCT CAAAGGCAGG CGCGCGCGGG GGGAAGTCAT CTCCATCGCT CTGGCAAACA CGGGCCAGCA TCAAGATACG GGGGCCAAAA TGATCCATGC GGCGGACGAC ACTACGTCCA ACATCGTTTC CAAATCCATC AGCATCGGCG AAGGGCGCGC CAGCTACCGG GGCCAGGTAA TCATGGGCAA AGGGCTTAAG GGGTGCAGGA ACAACACGGA ATGCGACGCC CTACTTCTGG CAGCCAACAG CCGTACGGAC ACCTACCCTG CCATCACGGT AAAAGGGGAT GGAGGCACGG TGCAGCATGA GGCATCCGTC TCCCAGGTCT CTGAAGAAAT GCTTTTTTAC ATGCAGCAGC GGGGCATCCC GAAAGCTGCG GCGATGTCTC TGGCCGTCAA TGGATTCATT AACGACCTCG TTCAGGAATT CCCCATGGAA TACTCTGTGG AGCTGCGCAG GCTCATTGAT CTGGAAATGG AAGACAGCAT CGGATAA
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Protein sequence | MSDTPDMSEN GNTQNLFDFD RSKGNFSFPE RHKFDAGYGL TEATIDYICD VKDDPEWVRQ FRKNALAVFE SKPMPTHWAS PDIKKIDFSQ IRYYLSDGER PKRSWDDVPE DVKRTFERLG VPEQERQFLA GVEAQYDSES AYSNMKEELR SQGVIFVNST EGLKHHEDVF RPWFGKVIPT GDNKFSALNS AVFSGGSFIY VPKGVKLKHP LQAYFRINSE NFGQFERTLI IADEGAELMY MEGCTAPQFE TSTLHSAVVE LVALKGAKIQ YVTVQNWSSN VFNMVTKRGL AMEDAEIRWI DCNIGSGLTM KYPAVVLKGR RARGEVISIA LANTGQHQDT GAKMIHAADD TTSNIVSKSI SIGEGRASYR GQVIMGKGLK GCRNNTECDA LLLAANSRTD TYPAITVKGD GGTVQHEASV SQVSEEMLFY MQQRGIPKAA AMSLAVNGFI NDLVQEFPME YSVELRRLID LEMEDSIG
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