Gene Amuc_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0486 
Symbol 
ID6275576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp573822 
End bp574262 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content54% 
IMG OID642612536 
Productferric uptake regulator, Fur family 
Protein accessionYP_001877105 
Protein GI187734993 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.53591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.162007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCA AAACAGATTC CAAGCAGGCC GTCCGCACTG CCTCTACCCT GCCGGTCATT 
TCCGGGTTGA GGCTTACCAA GCAAAGGCAG GAAGTTTATC AGGTTCTTCT GGAACAAAGG
GATCATCCAA CAGCCAATGA AGTTTACCAG CGGGTACGCA AAAAACTCCC CAGCATCTCC
CTGGCCACCG TTTATAACTG CCTGGAGGCG CTGGTGAACC ACGGCCTGGT CAATCAGGTC
AACTTTGAAC GCAGTTCTTC CCGTTTCTGT CCCAATCTCG TTGAGCACGG ACACTTCCAG
GACACCCGGA CCGGACGCAT TTACGACATC ACCATCAAGG AAGGCGTGGA ACTGAAGGAA
TTCATCAACT TGCCCGACGA CGTGTGCGTG GAAGAAGCCC AAATCACCCT GAGGGGTTCC
ATCACCACGC CGCAGGGCTA A
 
Protein sequence
MNPKTDSKQA VRTASTLPVI SGLRLTKQRQ EVYQVLLEQR DHPTANEVYQ RVRKKLPSIS 
LATVYNCLEA LVNHGLVNQV NFERSSSRFC PNLVEHGHFQ DTRTGRIYDI TIKEGVELKE
FINLPDDVCV EEAQITLRGS ITTPQG