| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0484 |
|---|
| Symbol | |
|---|
| ID | 6275565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 573059 |
|---|
| End bp | 573376 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642612534 |
|---|
| Product | ribosomal protein L21 |
|---|
| Protein accession | YP_001877103 |
|---|
| Protein GI | 187734991 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0261] Ribosomal protein L21 |
|---|
| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.239256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.0811402 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATACG CAATTTTCAA AACAGGTGGC AAGCAGTACC GCGTCCAGAC GGGCGACGTG
ATCGACGTTG AATGCATCAA TACCCTCGAA GAGGGGGCCG AAGCAAGCTT CGATCAGGTG
CTTATGGTGG AAAATGACGG AAAAGTGACC GTCGGCACCC CCATGGTGGA AGGAGCTACG
GTCTCCGCCA AGGTGGTCAG CCAGTTCCGC GGCAAAAAGA TCATCGCTTT CAAATTTAAG
CGCCGCAAGG GCTTCCACAA GAAAAAAGGT TCCCGCCGCG CCATGACGAA GCTGGAAATC
ACTGCTATCA ACGCCTAA
|
|---|
| Protein sequence | MAYAIFKTGG KQYRVQTGDV IDVECINTLE EGAEASFDQV LMVENDGKVT VGTPMVEGAT
VSAKVVSQFR GKKIIAFKFK RRKGFHKKKG SRRAMTKLEI TAINA
|
|---|
| |