Gene Amuc_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0473 
Symbol 
ID6275793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp561940 
End bp562911 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content55% 
IMG OID642612523 
Producthypothetical protein 
Protein accessionYP_001877092 
Protein GI187734980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTTT CACGCGGCCT CATCCGAACT TTCCTGGCTC TTCTGGCATT GGGGGCGATT 
CCCTTATCTG CAGAAGAACA GCCGCTTCCT GCTCAAGGCG GTCCCGTCGT GTCCATTACT
GACCTGAAGC CCGTAAAGCT GGAGAGGGAT GCTCACAGCA AGCTTCTTGT AGCGCAATGC
ACTGTCAATG GAGTCCCATG CAATCTTATT GTGGACACGG CGGCTTCCCA CACCACATTT
GATATCAAAT TCATCAAAAA GAATTTTCCC GGCCTGCCGC TTGAAGACGT TCAAATAGCC
CCTGGTTCCA ACGTCCATGC CGTCCCCCGG CTATTTGCCA TGCGGTCCTT CTCCATGGGA
GGGCTTCATA TCAAAAACTT CTTCGGCCTT GCCCTGGATC TTACTCCCCT GCAAAAGGAC
ATGCAGGTGA AGATAGACGG CATCCTGGGC ATCAACTACC TGGGGTTCTC TCCGTTCCTG
CTGTCCGTCA GGAATGCTTC CCTGCAGTTT CTGGAACGCT CCCGCTTCCC CCAACACAGG
AAACCGCTGG ATGTGGAACG TGATCCTTCC GGAATTTTTT ACATCCGCTG TTCCCGGGGG
GGGGGAGATA CTTTCCCGCT GGCTCTTGAC TCCGGCTCTT CTCTTTCCAT GGCCCCGCTG
GAACAGTGGC CCGCAGATCC GAACGGCAAT CAGCTCACCA CCAAGGCAAC CGACATTAAC
GGACACAATG GGGACTGCAC TGTCATGAAA CTGGGTATCC CCTCCACGCT CCGCATGGGA
CCGGACTTCC AAATGGACGG CCTTTCCTTC GCCGTAACGG GAACAGGGGG CCGATACCAG
ATCGGCGTGG ATACTTTCCA GCATTTTGAC ATCATCATTG ATGCTCCGCA GGGGGAAGTC
TTCGCCCTTC CTCCCCATTC CAGGCCGGAG CCCCAGGGGC AAAAAGCCCC CGATATCAAA
CAGGAATCTT GA
 
Protein sequence
MLFSRGLIRT FLALLALGAI PLSAEEQPLP AQGGPVVSIT DLKPVKLERD AHSKLLVAQC 
TVNGVPCNLI VDTAASHTTF DIKFIKKNFP GLPLEDVQIA PGSNVHAVPR LFAMRSFSMG
GLHIKNFFGL ALDLTPLQKD MQVKIDGILG INYLGFSPFL LSVRNASLQF LERSRFPQHR
KPLDVERDPS GIFYIRCSRG GGDTFPLALD SGSSLSMAPL EQWPADPNGN QLTTKATDIN
GHNGDCTVMK LGIPSTLRMG PDFQMDGLSF AVTGTGGRYQ IGVDTFQHFD IIIDAPQGEV
FALPPHSRPE PQGQKAPDIK QES