Gene Amuc_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0456 
Symbol 
ID6275875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp544592 
End bp545053 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content55% 
IMG OID642612506 
ProductDoxX family protein 
Protein accessionYP_001877075 
Protein GI187734963 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGA ATAAAAGCAA ACCATCCGCA TGCCGCCTGC TTGGCCCCTT GGCCACCAAC 
ACCAGTATGG ATTTCGGCGT TCTGCTGCTG CGCCTGGGAG TAGCAGTCAT GATGCTTGTG
CATGGCATTC CCAAACTGGG CATGCTCATC AGCGGAAACT GGTCGGCCTT CCAGGATCCT
CTGGGAATCG GCAATTTTCT GTCCCTGCTG CTGTGCGTAG GTGCGGAATT CGGTTGCTCC
ATCCTCATTT TGCTTGGGTT CCTGACCCGC CTGGCCTCCC TTATCCTGGT TATTAACATG
TGTGTGGCGC TCTTTCTTGT CCTTGGCCTC TCCGGCTGGG GAGCACAGGA ACTAGCGGCC
ATCTACCTGC TGATCTATCT AACCCTCTTC TATACGGGAC CGGGCAAATT CTCCCTGGAT
GCCTGGTGGC TCTGGCGCGA CTGCAAGATA GAAGTGGAAT GA
 
Protein sequence
MEQNKSKPSA CRLLGPLATN TSMDFGVLLL RLGVAVMMLV HGIPKLGMLI SGNWSAFQDP 
LGIGNFLSLL LCVGAEFGCS ILILLGFLTR LASLILVINM CVALFLVLGL SGWGAQELAA
IYLLIYLTLF YTGPGKFSLD AWWLWRDCKI EVE