| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0446 |
|---|
| Symbol | |
|---|
| ID | 6274423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 529944 |
|---|
| End bp | 531029 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642612496 |
|---|
| Product | glycine cleavage system T protein |
|---|
| Protein accession | YP_001877065 |
|---|
| Protein GI | 187734953 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.190481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 81 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA CAGACGTCAA ATCCACCCCC CTGGCAACTA AACACGTTGA ACTGGGAGCC
AGAATGGTTC CTTTCGCCGG CTGGAATATG CCGGTGCAGT ACACCGGCAT TCTGGACGAA
CACAAAGCAG TGCGCGAAAC CTGCGGCATT TTTGACATCT CCCACATGGG GCAGTTCACG
GTAGCCGGCG GTTCCGCTGC AGCATGGCTG AACTCCATGC TGACCAATGA CATCAACAAA
CTGAATGTAG GGCAGGGGCA ATACTCCGTC ATGCTCAATG ACAGGGCCGG AGTCATTGAC
GACCTCATCC TGTACCGGAT GGAACCGGAA ACCTTCTTCG TAGTGGTGAA CGCCTCCAAG
ATTGATGAAG ACTTCGCATG GCTTTCCGCC CATCAACCTG CAGGCGTAAC TCTGGAAAAC
CACTCCGACG AATACGTGGG GCTGGCTGTT CAAGGTCCCG AATGCGGAGA AGTATTCTCC
CGCGTCATCC CCGGCGTGGA ACTTCCCCCC CGCAATGGAA TCTCCCGCAT CACGGCGGAA
GGGACGGATC TCATTATCTG CCGCACCGGC TATACCGGGG AAGATGGTTT TGAATTCTTC
TGCCCGGCTA AGGAAGGCGT CAAATGGTTT GAAGCCTTTC TTGGAGCAGG AGCCAAACCC
TGCGGCCTGG GCGCCCGCGA CAGCCTGCGT CTGGAAATGT GCTATCCTCT GAACGGCTCC
GACCTCTCTC CGGACAAAAC GCCTCTGGAA GCCGGGCTCG GATTCTTCTG CGCGCTGGAT
ACGGACTTCA TCGGTTCCGA TATTCTCCGG GAACAAAAAG CCAACGGCCT CAGCCGTCGG
CTGGCCGCTA TTGAATACAC CGGCAAGGGA GCTCCTCCCC GCGCCCACTA TGCCGTGCAC
GTCCCCGGCG GAGAAGCCAT CGGAGAACTT ACCAGCGGCG TGCTCTCTCC TTCGCTGATG
AAGGGCATTG CCCTGGCCTA CCTGCCTGCC GCCTATGCCA AGGTCGGCAC GGAGCTGGAA
ATTGACGTAA GGGGAAGGAA ATTCCCAGCC GTGGTCGTAA AAAAACCCTT TTATAAAAAA
GGCTGA
|
|---|
| Protein sequence | MTDTDVKSTP LATKHVELGA RMVPFAGWNM PVQYTGILDE HKAVRETCGI FDISHMGQFT
VAGGSAAAWL NSMLTNDINK LNVGQGQYSV MLNDRAGVID DLILYRMEPE TFFVVVNASK
IDEDFAWLSA HQPAGVTLEN HSDEYVGLAV QGPECGEVFS RVIPGVELPP RNGISRITAE
GTDLIICRTG YTGEDGFEFF CPAKEGVKWF EAFLGAGAKP CGLGARDSLR LEMCYPLNGS
DLSPDKTPLE AGLGFFCALD TDFIGSDILR EQKANGLSRR LAAIEYTGKG APPRAHYAVH
VPGGEAIGEL TSGVLSPSLM KGIALAYLPA AYAKVGTELE IDVRGRKFPA VVVKKPFYKK
G
|
|---|
| |