| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0439 |
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| Symbol | |
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| ID | 6275627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 522388 |
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| End bp | 522765 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642612489 |
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| Product | ribosomal protein S13 |
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| Protein accession | YP_001877058 |
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| Protein GI | 187734946 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00237388 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGCC TTTTCGGTAC AGAAATACCC AACGAGAAGC GCATCGAGGC TTCCCTTCCG
TATATTTACG GAATTGGTCG CTCGACTTCT AAGAGAATCC TGGAACAAGC AGGCATCAAT
CCCGACATCC GCACGGGACA GCTTACCGAC GAACAGCTCA CGAAGATTGT TCAAGTAATC
ACCACCGACG GCATTTTGAT TGAAGGTGAC CTTCGTCGTG AAAAGCAATC CATTCTCAAG
CGTTTGACCT CCATCAACTG CTATCGTGGT CAGCGCCACC GCCGCGGCCT TCCGGTACGC
GGTCAGCGTA CCCGCACGAA TGCCCGCACC CGTAAAGGCA AGAAGAAGAC CGTTGGCGCG
CAGGCCAAGA AGAAGTAA
|
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| Protein sequence | MARLFGTEIP NEKRIEASLP YIYGIGRSTS KRILEQAGIN PDIRTGQLTD EQLTKIVQVI
TTDGILIEGD LRREKQSILK RLTSINCYRG QRHRRGLPVR GQRTRTNART RKGKKKTVGA
QAKKK
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