| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0437 |
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| Symbol | |
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| ID | 6274520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 521156 |
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| End bp | 521767 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642612487 |
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| Product | ribosomal protein S4 |
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| Protein accession | YP_001877056 |
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| Protein GI | 187734944 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000069036 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT ATACCGGTCC CCGCGATAAA GTGTCCCGCC GTTTTGGCGT TGCCCTTTTC
GGTTCCACCA AGGCTCTTGA AAAGCGCCCC TTCCCTCCCG GCCAGCATGG CATGCGCGCC
GGCCGCAAGA AGAAATCCGA CTATGGCGTG ATGCTTGCTG AAAAACAGAA ACTGCGTTTC
CAGTACGGTG TGCTTGAAGG TCAGTTCCGC AAGTATTATG CAGAAGCCGC CCGCCGCCGC
GGCATTACCG GCGATATTCT GCTTCAGCTC CTTGAGCTTC GTCTGGACAA TGTTGTGTAC
CGCCTCGGCT TCAGCAATAC CCGTGCCGGC GCCCGTCAGC TTGTTTCCCA CGGTCACATC
ACCGTGAACG GCAAGAAGAC GAATATCGCG TCCTACTCCT GCCGTCCGGG CGATGTCATT
GCCGTAGGCG GCAAGGCTTC TTCCCAGCAG CTGGTTACCC GTTTCCTTGA CCTGACTCAG
GCTACTGTGG TTCCTGACTG GCTGGAATGC GACCGTGACA AGCTCACGGG CAAGATTGCC
CGCGTGCCTT CCAAGGAAGA GATTGCTCCC ATCGTCAACG AGCAGCTCAT CGTGGAATTT
TACTCCCGTT AA
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| Protein sequence | MARYTGPRDK VSRRFGVALF GSTKALEKRP FPPGQHGMRA GRKKKSDYGV MLAEKQKLRF
QYGVLEGQFR KYYAEAARRR GITGDILLQL LELRLDNVVY RLGFSNTRAG ARQLVSHGHI
TVNGKKTNIA SYSCRPGDVI AVGGKASSQQ LVTRFLDLTQ ATVVPDWLEC DRDKLTGKIA
RVPSKEEIAP IVNEQLIVEF YSR
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