Gene Amuc_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0429 
Symbol 
ID6274661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp513344 
End bp513964 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content56% 
IMG OID642612479 
Productnickel-cobalt-cadmium resistance protein 
Protein accessionYP_001877048 
Protein GI187734936 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCC ACGCAAAATC ACTCAACGAA CGTTTCCGCA CCCTCATCTC CCTGATTTTC 
GGTCTGGCTA TCGGCTGTTC CCTGCTCTTC GGGGAATCCC GCTGGGAAAC GTCTCCTCTC
ATTGAAGAAA GCCTCATGCT CCTGGCCTGC TTCATGGCCG GCATAGGCGC CTTCGGGCGC
ATCTGGTGCT CCCTCTACAT TGCAGGTTAT AAAAACAACG TCCTGGTTAC TGACGGGCCA
TACTCCATGT GCCGCAACCC GCTCTATTTC TTCAGCTTCG TTGGCGGCAT AGGCGTATCC
TGCGCTACGG AGACCTTCAC CATCCCCCTG CTTACGGCGC TGGCGTTCGG AATCTACTAC
CCGTCCGTCA TCAGAAAGGA ACAGGAAAGG CTCCTCACCC TTTTCGGAGA CGCCTACCGG
AACTATTGCA GGAACGTTCC CACCTTCATT CCCTCCCTCT CACGGCTCAA ACCGCCGCCG
GCCGCCTACT CCGTCAATCC CGCCACGTTC ACGCACAACA TTGTGGATGC GCTGTGGTTC
ATCTGGTTCA TCGGCATCTT TGAATTCATC AGCGGACTTC ATGAAGCCGG AATGCTCCCC
GTATGGTTCC TCATTCCGTA A
 
Protein sequence
MQAHAKSLNE RFRTLISLIF GLAIGCSLLF GESRWETSPL IEESLMLLAC FMAGIGAFGR 
IWCSLYIAGY KNNVLVTDGP YSMCRNPLYF FSFVGGIGVS CATETFTIPL LTALAFGIYY
PSVIRKEQER LLTLFGDAYR NYCRNVPTFI PSLSRLKPPP AAYSVNPATF THNIVDALWF
IWFIGIFEFI SGLHEAGMLP VWFLIP