| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0419 |
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| Symbol | |
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| ID | 6274837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 499800 |
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| End bp | 501761 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642612469 |
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| Product | General substrate transporter |
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| Protein accession | YP_001877038 |
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| Protein GI | 187734926 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACC AAGAAAACAT GAAAGCCGCC GTTCCGGATG CGGCCAGGCG ATATATGCGC
TATCTCCTCA TCATGGCCGG TTTGGGCGGC CTGCTCTACG GTGTGGACGT TGGCGTGATT
GCTGCCGCGC TTCCCTACAT TGAGCAGACG GCCGGTTTTA ATCCCTCCCA GCTTTCCCAG
GTGGTGGCCG CCGTGCTGTT CGGCAGCGTT CTTTCTTCTC TGTTTGCGGG CTATCTGGCC
GACAAGATGG GACGCAAGGC GTTGATTACC GTGGCCGCAG CCTTGTTCAC GGCGAGCATC
CCCGTGATCT GCCTGTCCCA GGAAGTATTC GGCATTATGT TGCTGGGCCG TATTCTTCAG
GGCGCCAGCG CCGGTATTGT GGGCGTGGTC GTTCCGCTGT ATCTGGCCGA GTGCCTGAGC
GCCGAGTCCC GCGGCAAGGG AACGGGAATG TTCCAGTTCC TGCTGACGGT GGGCCTGGTG
TTTGCCGCCG TCGTCGGTTT GCTTGCCGCC AGTTATGTGG GCGGCGTCGA GAATTCCGGC
GCGAGCGAAG AATCGCTGAC TTCCGCCAAG GTTCTGGCCT GGCAGGCTAT TTTCTGGGTT
TGCGCCATTC CCGGCCTGTT CCTGTTTTTC GGTTCCTTCC GTTTGAGCGA ATCTCCCCGC
TACCTGTTCC GCCGCGGCCG CAAGGATGAA GCCATGGCTG TGCTGGTGCG CAGTTACGGG
GATGCCCGCG CCAAGGAAGT GTTTGATGAA ATGGTCCATA TTGAAGAGGA AGAGAAGCAG
AAGGCGGAGG AACTCAAAAA GCAGAGTTCT TCCGGCGAGT CCCTTCTTCA GCGCAAGTAT
ATCTATCCCT TTGTTCTGGC GGTGCTCGTT CTGGCGTTTA CGCAGGCTAC GGGCATTAAT
TCCGTGCTGA ATTATTCCGT GAAGGTATTC CAGCAGGCAG GCTTGGAAGG CACCACCGCC
AACTGGGCAG ACTTTACCAT CAAGGTCGTG AACTGCTTGA TGACTATTGT CGCCATGGTG
CTGGTGGACC GCAAGGGCCG CAAGTTCCTG CTTAAAATCG GAACGGCCGG CATCGTGGTC
GGCCTTCTTG GCACCGGGTT CCTGTTCAAT AATGTGGAAA AAGCCCGCAA GGATGTGACT
GCGGATGTGG CTGCCCTGCT GGCCGCCCAG AGCCCTTCCG TCCAGAAGGA GTTTGAACAG
GGCAAGGATG TGGGTTCCAT CCGAACGCTT CAATTGGAAC GCACTCCGGA TTCCCCCTTC
ATCAGGAATC TTCTTGCCAA GAACGGCATG GCCGACAAGG ATATCAACAG GATGCAGCTC
ATCATCACCT ATGACCAGCC GGAAGCCAAT CCCGCCTGGT ACCAGTTCCT GATGGGGTCT
TCCACCCAGC TTTCCGTCGT AGAGTTTTCC GAACTGACCA AGGATACCAA GGATATCAAG
AAGGAAGAGG ACAGGGCTTC CCTGGCCGTG ATCAAGGCCG TTCCGGATTC CACCAATAAA
ATGGTGGTGA ACGGCAAGGA CGGCTATGCC ATGAAGCCCG TTTCCATTCT GAAGGCGGAA
TTGGGCGAAA AGCCGGATAC CTCCATGGGC TGGGGCGTGA CTGCGTTCTT CATTATCTTC
ATTGCTTTTT ATGCCACCGG CCCCGGCGTA TGCGTCTGGC TGGCACTGTC CGAGCTGATG
CCAGCCCGCA TCCGCTCCAA CGGTATGGCG ATTGCTCTGT TGATCAACCA GCTGGTTTCT
ACGGTTATCG CCGGTTCCTT CCTCCCGTGG GTGGGCAGCT GCGGTTATTC CGGCGTGTTC
TTTACGCTGG GCGGCATTAC GGTGCTGTAT TTCATTACGG TGACCTTCTT CCTGCCTGAA
ACCAAGGGAC GTTCCCTGGA GGAAATTGAA GGTTACTTCA CAACAGGCAA GATGCCGGAA
GATCCCAAGA TGATCGGCGA AGGCATAGAA GCGGAGGAAT AA
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| Protein sequence | MTDQENMKAA VPDAARRYMR YLLIMAGLGG LLYGVDVGVI AAALPYIEQT AGFNPSQLSQ
VVAAVLFGSV LSSLFAGYLA DKMGRKALIT VAAALFTASI PVICLSQEVF GIMLLGRILQ
GASAGIVGVV VPLYLAECLS AESRGKGTGM FQFLLTVGLV FAAVVGLLAA SYVGGVENSG
ASEESLTSAK VLAWQAIFWV CAIPGLFLFF GSFRLSESPR YLFRRGRKDE AMAVLVRSYG
DARAKEVFDE MVHIEEEEKQ KAEELKKQSS SGESLLQRKY IYPFVLAVLV LAFTQATGIN
SVLNYSVKVF QQAGLEGTTA NWADFTIKVV NCLMTIVAMV LVDRKGRKFL LKIGTAGIVV
GLLGTGFLFN NVEKARKDVT ADVAALLAAQ SPSVQKEFEQ GKDVGSIRTL QLERTPDSPF
IRNLLAKNGM ADKDINRMQL IITYDQPEAN PAWYQFLMGS STQLSVVEFS ELTKDTKDIK
KEEDRASLAV IKAVPDSTNK MVVNGKDGYA MKPVSILKAE LGEKPDTSMG WGVTAFFIIF
IAFYATGPGV CVWLALSELM PARIRSNGMA IALLINQLVS TVIAGSFLPW VGSCGYSGVF
FTLGGITVLY FITVTFFLPE TKGRSLEEIE GYFTTGKMPE DPKMIGEGIE AEE
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